Hb_002053_170

Information

Type -
Description -
Location Contig2053: 187713-189553
Sequence    

Annotation

kegg
ID rcu:RCOM_0771070
description cytochrome P450, putative (EC:1.14.13.77)
nr
ID XP_002529895.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID I7C6E8
description Beta-amyrin 28-oxidase OS=Panax ginseng PE=2 SV=1
trembl
ID B9SV76
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0771070 PE=3 SV=1
Gene Ontology
ID GO:0005506
description beta-amyrin 28-oxidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002053_170 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_037684_010 0.1235248884 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105645015 [Jatropha curcas]
3 Hb_002213_050 0.1253923858 - - PREDICTED: uncharacterized protein LOC105630318 isoform X3 [Jatropha curcas]
4 Hb_002808_010 0.1361495695 - - cinnamoyl-CoA reductase [Hevea brasiliensis]
5 Hb_001131_050 0.152399853 - - hypothetical protein EUGRSUZ_C02968 [Eucalyptus grandis]
6 Hb_020817_030 0.1611616963 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
7 Hb_016564_050 0.165876379 - - -
8 Hb_002374_520 0.1673473524 - - early nodulin 8 precursor family protein [Populus trichocarpa]
9 Hb_001174_020 0.1740358264 - - -
10 Hb_005391_050 0.1766793915 - - PREDICTED: uncharacterized protein LOC105643654 [Jatropha curcas]
11 Hb_000705_050 0.1767202922 - - PREDICTED: uncharacterized protein C167.05 [Vitis vinifera]
12 Hb_142056_010 0.177892408 - - PREDICTED: MATE efflux family protein 1 isoform X2 [Jatropha curcas]
13 Hb_000899_060 0.1862841408 - - PREDICTED: uncharacterized protein LOC105793631 [Gossypium raimondii]
14 Hb_001221_470 0.1869909498 - - PREDICTED: uncharacterized protein LOC105648774 [Jatropha curcas]
15 Hb_000046_390 0.1871646246 - - PREDICTED: CASP-like protein 1D1 [Jatropha curcas]
16 Hb_001277_380 0.1872278701 - - PREDICTED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 3 [Tarenaya hassleriana]
17 Hb_004785_170 0.190140389 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
18 Hb_000245_100 0.1921765409 - - PREDICTED: uncharacterized protein LOC105631555 [Jatropha curcas]
19 Hb_034688_030 0.1958462437 - - PREDICTED: uncharacterized protein LOC105642049 [Jatropha curcas]
20 Hb_003126_120 0.1959328945 - - PREDICTED: cytochrome b561 and DOMON domain-containing protein At5g47530-like [Jatropha curcas]

Gene co-expression network

sample Hb_002053_170 Hb_002053_170 Hb_037684_010 Hb_037684_010 Hb_002053_170--Hb_037684_010 Hb_002213_050 Hb_002213_050 Hb_002053_170--Hb_002213_050 Hb_002808_010 Hb_002808_010 Hb_002053_170--Hb_002808_010 Hb_001131_050 Hb_001131_050 Hb_002053_170--Hb_001131_050 Hb_020817_030 Hb_020817_030 Hb_002053_170--Hb_020817_030 Hb_016564_050 Hb_016564_050 Hb_002053_170--Hb_016564_050 Hb_000899_060 Hb_000899_060 Hb_037684_010--Hb_000899_060 Hb_002374_520 Hb_002374_520 Hb_037684_010--Hb_002374_520 Hb_037684_010--Hb_020817_030 Hb_000245_100 Hb_000245_100 Hb_037684_010--Hb_000245_100 Hb_002598_020 Hb_002598_020 Hb_037684_010--Hb_002598_020 Hb_004374_040 Hb_004374_040 Hb_002213_050--Hb_004374_040 Hb_004785_170 Hb_004785_170 Hb_002213_050--Hb_004785_170 Hb_003126_120 Hb_003126_120 Hb_002213_050--Hb_003126_120 Hb_000046_390 Hb_000046_390 Hb_002213_050--Hb_000046_390 Hb_000152_520 Hb_000152_520 Hb_002213_050--Hb_000152_520 Hb_001174_020 Hb_001174_020 Hb_002808_010--Hb_001174_020 Hb_002808_010--Hb_000046_390 Hb_025161_060 Hb_025161_060 Hb_002808_010--Hb_025161_060 Hb_005116_040 Hb_005116_040 Hb_002808_010--Hb_005116_040 Hb_001019_030 Hb_001019_030 Hb_002808_010--Hb_001019_030 Hb_005391_050 Hb_005391_050 Hb_001131_050--Hb_005391_050 Hb_001976_100 Hb_001976_100 Hb_001131_050--Hb_001976_100 Hb_000009_250 Hb_000009_250 Hb_001131_050--Hb_000009_250 Hb_000023_180 Hb_000023_180 Hb_001131_050--Hb_000023_180 Hb_001709_080 Hb_001709_080 Hb_001131_050--Hb_001709_080 Hb_000080_100 Hb_000080_100 Hb_001131_050--Hb_000080_100 Hb_020817_030--Hb_000899_060 Hb_007802_010 Hb_007802_010 Hb_020817_030--Hb_007802_010 Hb_001907_050 Hb_001907_050 Hb_020817_030--Hb_001907_050 Hb_011470_010 Hb_011470_010 Hb_020817_030--Hb_011470_010 Hb_001277_380 Hb_001277_380 Hb_016564_050--Hb_001277_380 Hb_007295_020 Hb_007295_020 Hb_016564_050--Hb_007295_020 Hb_145080_010 Hb_145080_010 Hb_016564_050--Hb_145080_010 Hb_094437_030 Hb_094437_030 Hb_016564_050--Hb_094437_030 Hb_112791_030 Hb_112791_030 Hb_016564_050--Hb_112791_030 Hb_006351_120 Hb_006351_120 Hb_016564_050--Hb_006351_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.182644 0 0.569311 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.145424 0.271443

CAGE analysis