Hb_002095_050

Information

Type -
Description -
Location Contig2095: 86463-138660
Sequence    

Annotation

kegg
ID egr:104447479
description uncharacterized LOC104447479
nr
ID XP_010059510.1
description PREDICTED: uncharacterized protein LOC104447479 [Eucalyptus grandis]
swissprot
ID Q9M0X5
description Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=3 SV=1
trembl
ID A0A067JAH5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21282 PE=4 SV=1
Gene Ontology
ID GO:0016772
description cysteine-rich rlk 29

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21666: 96914-100047 , PASA_asmbl_21667: 105471-106630 , PASA_asmbl_21668: 108823-109311 , PASA_asmbl_21669: 113020-113292
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002095_050 0.0 - - PREDICTED: uncharacterized protein LOC104447479 [Eucalyptus grandis]
2 Hb_001776_130 0.1182330209 - - metallothionein [Hevea brasiliensis]
3 Hb_004306_130 0.1232010141 - - PREDICTED: uncharacterized protein LOC105644385 isoform X1 [Jatropha curcas]
4 Hb_005993_030 0.1293115422 - - putative senescence-associated protein SAG102 [Populus trichocarpa]
5 Hb_000416_190 0.130382008 - - -
6 Hb_003687_040 0.1362953074 - - PREDICTED: uncharacterized protein LOC105632153 [Jatropha curcas]
7 Hb_014361_170 0.1373323263 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 37 [Jatropha curcas]
8 Hb_000731_280 0.1406154719 - - PREDICTED: uncharacterized protein LOC105649351 isoform X1 [Jatropha curcas]
9 Hb_000061_310 0.1474339374 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X1 [Jatropha curcas]
10 Hb_010683_070 0.1488791189 - - PREDICTED: DNA (cytosine-5)-methyltransferase CMT2 isoform X1 [Jatropha curcas]
11 Hb_001235_160 0.1489522383 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001294_040 0.1506478269 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
13 Hb_003688_220 0.1522135775 - - unknown [Populus trichocarpa]
14 Hb_000120_300 0.1531993481 - - PREDICTED: kinesin-like calmodulin-binding protein isoform X1 [Eucalyptus grandis]
15 Hb_002463_050 0.1534491747 - - conserved hypothetical protein [Ricinus communis]
16 Hb_003759_040 0.1568250744 - - PREDICTED: aldo-keto reductase family 4 member C9-like [Jatropha curcas]
17 Hb_002085_090 0.1586369085 - - -
18 Hb_001158_120 0.1624164888 - - PREDICTED: uncharacterized protein LOC105648761 isoform X1 [Jatropha curcas]
19 Hb_000866_040 0.1630686051 - - PREDICTED: cytochrome P450 86A8-like [Jatropha curcas]
20 Hb_001240_050 0.1631575178 - - PREDICTED: CSC1-like protein At1g32090 [Jatropha curcas]

Gene co-expression network

sample Hb_002095_050 Hb_002095_050 Hb_001776_130 Hb_001776_130 Hb_002095_050--Hb_001776_130 Hb_004306_130 Hb_004306_130 Hb_002095_050--Hb_004306_130 Hb_005993_030 Hb_005993_030 Hb_002095_050--Hb_005993_030 Hb_000416_190 Hb_000416_190 Hb_002095_050--Hb_000416_190 Hb_003687_040 Hb_003687_040 Hb_002095_050--Hb_003687_040 Hb_014361_170 Hb_014361_170 Hb_002095_050--Hb_014361_170 Hb_000018_090 Hb_000018_090 Hb_001776_130--Hb_000018_090 Hb_002995_010 Hb_002995_010 Hb_001776_130--Hb_002995_010 Hb_005834_050 Hb_005834_050 Hb_001776_130--Hb_005834_050 Hb_003759_040 Hb_003759_040 Hb_001776_130--Hb_003759_040 Hb_003688_220 Hb_003688_220 Hb_001776_130--Hb_003688_220 Hb_009907_020 Hb_009907_020 Hb_001776_130--Hb_009907_020 Hb_000866_040 Hb_000866_040 Hb_004306_130--Hb_000866_040 Hb_004306_130--Hb_000416_190 Hb_001266_130 Hb_001266_130 Hb_004306_130--Hb_001266_130 Hb_002675_230 Hb_002675_230 Hb_004306_130--Hb_002675_230 Hb_004306_130--Hb_005993_030 Hb_000731_280 Hb_000731_280 Hb_005993_030--Hb_000731_280 Hb_005993_030--Hb_000866_040 Hb_002918_120 Hb_002918_120 Hb_005993_030--Hb_002918_120 Hb_005993_030--Hb_003687_040 Hb_000941_010 Hb_000941_010 Hb_005993_030--Hb_000941_010 Hb_001195_740 Hb_001195_740 Hb_005993_030--Hb_001195_740 Hb_000009_420 Hb_000009_420 Hb_000416_190--Hb_000009_420 Hb_010868_040 Hb_010868_040 Hb_000416_190--Hb_010868_040 Hb_003398_040 Hb_003398_040 Hb_000416_190--Hb_003398_040 Hb_000120_300 Hb_000120_300 Hb_000416_190--Hb_000120_300 Hb_000061_310 Hb_000061_310 Hb_003687_040--Hb_000061_310 Hb_001019_160 Hb_001019_160 Hb_003687_040--Hb_001019_160 Hb_031385_010 Hb_031385_010 Hb_003687_040--Hb_031385_010 Hb_001040_080 Hb_001040_080 Hb_003687_040--Hb_001040_080 Hb_000230_360 Hb_000230_360 Hb_003687_040--Hb_000230_360 Hb_002463_050 Hb_002463_050 Hb_003687_040--Hb_002463_050 Hb_001040_060 Hb_001040_060 Hb_014361_170--Hb_001040_060 Hb_001294_040 Hb_001294_040 Hb_014361_170--Hb_001294_040 Hb_001627_010 Hb_001627_010 Hb_014361_170--Hb_001627_010 Hb_011381_070 Hb_011381_070 Hb_014361_170--Hb_011381_070 Hb_132840_020 Hb_132840_020 Hb_014361_170--Hb_132840_020 Hb_000111_390 Hb_000111_390 Hb_014361_170--Hb_000111_390
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0593502 0.705696 2.41508 0.810879 0.0743665 0.0823565
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0447709 0.0381734 0.00568368 0.733066 0.647331

CAGE analysis