Hb_001963_100

Information

Type transcription factor
Description TF Family: bZIP
Location Contig1963: 157556-169424
Sequence    

Annotation

kegg
ID rcu:RCOM_1105770
description transcription factor hy5, putative
nr
ID XP_012084505.1
description PREDICTED: bZIP transcription factor 17-like [Jatropha curcas]
swissprot
ID O22208
description bZIP transcription factor 17 OS=Arabidopsis thaliana GN=BZIP17 PE=1 SV=2
trembl
ID A0A067K5I5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20138 PE=4 SV=1
Gene Ontology
ID GO:0003700
description transcription factor

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19685: 157708-167882 , PASA_asmbl_19687: 161388-161577 , PASA_asmbl_19688: 164001-164295
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001963_100 0.0 transcription factor TF Family: bZIP PREDICTED: bZIP transcription factor 17-like [Jatropha curcas]
2 Hb_000215_140 0.0794883886 - - PREDICTED: phosphoinositide 3-kinase regulatory subunit 4-like [Malus domestica]
3 Hb_025193_040 0.0829019022 - - PREDICTED: uncharacterized protein LOC105647286 [Jatropha curcas]
4 Hb_000230_260 0.0829989881 - - PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Jatropha curcas]
5 Hb_000412_010 0.0830665777 - - hect ubiquitin-protein ligase, putative [Ricinus communis]
6 Hb_007632_010 0.083473612 - - PREDICTED: E3 ubiquitin-protein ligase UPL1 isoform X1 [Jatropha curcas]
7 Hb_000667_030 0.0849477586 - - PREDICTED: protein transport protein SEC23-like [Jatropha curcas]
8 Hb_000720_130 0.0870215198 - - hypothetical protein PRUPE_ppa012392mg [Prunus persica]
9 Hb_003060_060 0.0928892768 - - PREDICTED: protein transport protein SEC31 homolog B [Jatropha curcas]
10 Hb_004019_120 0.0937075723 - - PREDICTED: conserved oligomeric Golgi complex subunit 1 [Jatropha curcas]
11 Hb_041327_010 0.0979800989 - - PREDICTED: la-related protein 1A isoform X1 [Jatropha curcas]
12 Hb_000395_070 0.0982971668 - - PREDICTED: serine/threonine-protein kinase BLUS1 isoform X2 [Jatropha curcas]
13 Hb_000264_350 0.0986632998 - - PREDICTED: uncharacterized protein LOC105649541 [Jatropha curcas]
14 Hb_000261_480 0.0990819799 - - 26S proteasome regulatory subunit family protein [Populus trichocarpa]
15 Hb_002639_080 0.1005411763 - - PREDICTED: large proline-rich protein BAG6 isoform X1 [Jatropha curcas]
16 Hb_001440_030 0.1009228193 - - PREDICTED: exocyst complex component SEC8 [Jatropha curcas]
17 Hb_000473_110 0.1025795869 - - PREDICTED: PP2A regulatory subunit TAP46 [Jatropha curcas]
18 Hb_005215_010 0.1029042471 - - PREDICTED: probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Jatropha curcas]
19 Hb_011819_020 0.1039040164 - - PREDICTED: uncharacterized protein LOC105643703 isoform X1 [Jatropha curcas]
20 Hb_000313_120 0.1041809348 - - PREDICTED: ALG-2 interacting protein X [Jatropha curcas]

Gene co-expression network

sample Hb_001963_100 Hb_001963_100 Hb_000215_140 Hb_000215_140 Hb_001963_100--Hb_000215_140 Hb_025193_040 Hb_025193_040 Hb_001963_100--Hb_025193_040 Hb_000230_260 Hb_000230_260 Hb_001963_100--Hb_000230_260 Hb_000412_010 Hb_000412_010 Hb_001963_100--Hb_000412_010 Hb_007632_010 Hb_007632_010 Hb_001963_100--Hb_007632_010 Hb_000667_030 Hb_000667_030 Hb_001963_100--Hb_000667_030 Hb_012490_090 Hb_012490_090 Hb_000215_140--Hb_012490_090 Hb_000215_140--Hb_000412_010 Hb_000313_120 Hb_000313_120 Hb_000215_140--Hb_000313_120 Hb_000720_130 Hb_000720_130 Hb_000215_140--Hb_000720_130 Hb_000215_140--Hb_000230_260 Hb_002025_330 Hb_002025_330 Hb_025193_040--Hb_002025_330 Hb_004143_160 Hb_004143_160 Hb_025193_040--Hb_004143_160 Hb_001440_030 Hb_001440_030 Hb_025193_040--Hb_001440_030 Hb_000922_030 Hb_000922_030 Hb_025193_040--Hb_000922_030 Hb_000872_010 Hb_000872_010 Hb_025193_040--Hb_000872_010 Hb_071130_010 Hb_071130_010 Hb_000230_260--Hb_071130_010 Hb_000069_120 Hb_000069_120 Hb_000230_260--Hb_000069_120 Hb_041327_010 Hb_041327_010 Hb_000230_260--Hb_041327_010 Hb_003060_060 Hb_003060_060 Hb_000230_260--Hb_003060_060 Hb_085781_020 Hb_085781_020 Hb_000230_260--Hb_085781_020 Hb_000230_260--Hb_000412_010 Hb_000412_010--Hb_003060_060 Hb_000395_070 Hb_000395_070 Hb_000412_010--Hb_000395_070 Hb_159558_010 Hb_159558_010 Hb_000412_010--Hb_159558_010 Hb_001550_060 Hb_001550_060 Hb_000412_010--Hb_001550_060 Hb_001628_070 Hb_001628_070 Hb_000412_010--Hb_001628_070 Hb_002639_080 Hb_002639_080 Hb_007632_010--Hb_002639_080 Hb_007632_010--Hb_000720_130 Hb_000574_530 Hb_000574_530 Hb_007632_010--Hb_000574_530 Hb_007576_210 Hb_007576_210 Hb_007632_010--Hb_007576_210 Hb_009486_170 Hb_009486_170 Hb_007632_010--Hb_009486_170 Hb_002333_050 Hb_002333_050 Hb_007632_010--Hb_002333_050 Hb_010294_010 Hb_010294_010 Hb_000667_030--Hb_010294_010 Hb_005215_010 Hb_005215_010 Hb_000667_030--Hb_005215_010 Hb_012518_070 Hb_012518_070 Hb_000667_030--Hb_012518_070 Hb_021297_050 Hb_021297_050 Hb_000667_030--Hb_021297_050 Hb_000494_050 Hb_000494_050 Hb_000667_030--Hb_000494_050 Hb_000317_100 Hb_000317_100 Hb_000667_030--Hb_000317_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.8957 35.7533 17.2833 35.0716 51.5983 28.9888
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.9695 14.5377 31.0177 50.6502 45.7648

CAGE analysis