Hb_001950_020

Information

Type -
Description -
Location Contig1950: 15817-16764
Sequence    

Annotation

kegg
ID rcu:RCOM_1153030
description Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, putative (EC:3.1.3.67)
nr
ID XP_002524915.1
description Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SFZ6
description Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, putative OS=Ricinus communis GN=RCOM_1153030 PE=4 SV=1
Gene Ontology
ID GO:0004721
description phosphatidylinositol- -trisphosphate 3-phosphatase and dual-specificity protein phosphatase pten isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19460: 16699-18654
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001950_020 0.0 - - Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, putative [Ricinus communis]
2 Hb_000834_240 0.1736974909 - - hypothetical protein JCGZ_07230 [Jatropha curcas]
3 Hb_069841_010 0.2051520169 - - resistance protein [Quercus suber]
4 Hb_001114_230 0.2061985753 - - -
5 Hb_012258_020 0.2117417998 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
6 Hb_001196_080 0.2176246721 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Jatropha curcas]
7 Hb_005568_130 0.2182349724 transcription factor TF Family: C2C2-Dof zinc finger protein, putative [Ricinus communis]
8 Hb_012725_040 0.227179494 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
9 Hb_027402_040 0.22978436 - - Thioredoxin II, putative [Ricinus communis]
10 Hb_009040_010 0.2331826166 transcription factor TF Family: C2C2-CO-like zinc finger protein, putative [Ricinus communis]
11 Hb_000284_180 0.2371635742 - - hypothetical protein EUGRSUZ_B01865 [Eucalyptus grandis]
12 Hb_022880_020 0.2378636354 - - PREDICTED: uncharacterized protein LOC105631661 [Jatropha curcas]
13 Hb_170674_010 0.239368414 - - hypothetical protein JCGZ_23765 [Jatropha curcas]
14 Hb_000836_370 0.2427747038 - - PREDICTED: protein REVEILLE 3-like isoform X1 [Jatropha curcas]
15 Hb_009372_010 0.2431868786 - - -
16 Hb_091226_010 0.249895703 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA isoform X1 [Jatropha curcas]
17 Hb_005736_050 0.2504344261 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Jatropha curcas]
18 Hb_002157_250 0.250831084 - - Pectinesterase-4 precursor, putative [Ricinus communis]
19 Hb_003226_080 0.2512196034 - - PREDICTED: RING-H2 finger protein ATL5-like [Jatropha curcas]
20 Hb_001484_100 0.2517523061 - - PREDICTED: cyanate hydratase [Jatropha curcas]

Gene co-expression network

sample Hb_001950_020 Hb_001950_020 Hb_000834_240 Hb_000834_240 Hb_001950_020--Hb_000834_240 Hb_069841_010 Hb_069841_010 Hb_001950_020--Hb_069841_010 Hb_001114_230 Hb_001114_230 Hb_001950_020--Hb_001114_230 Hb_012258_020 Hb_012258_020 Hb_001950_020--Hb_012258_020 Hb_001196_080 Hb_001196_080 Hb_001950_020--Hb_001196_080 Hb_005568_130 Hb_005568_130 Hb_001950_020--Hb_005568_130 Hb_000836_370 Hb_000836_370 Hb_000834_240--Hb_000836_370 Hb_000834_240--Hb_001114_230 Hb_000152_640 Hb_000152_640 Hb_000834_240--Hb_000152_640 Hb_000179_180 Hb_000179_180 Hb_000834_240--Hb_000179_180 Hb_005054_310 Hb_005054_310 Hb_000834_240--Hb_005054_310 Hb_069841_010--Hb_001196_080 Hb_000732_070 Hb_000732_070 Hb_069841_010--Hb_000732_070 Hb_000997_150 Hb_000997_150 Hb_069841_010--Hb_000997_150 Hb_000988_030 Hb_000988_030 Hb_069841_010--Hb_000988_030 Hb_000671_060 Hb_000671_060 Hb_069841_010--Hb_000671_060 Hb_001079_030 Hb_001079_030 Hb_069841_010--Hb_001079_030 Hb_009372_010 Hb_009372_010 Hb_001114_230--Hb_009372_010 Hb_001114_230--Hb_000836_370 Hb_003506_070 Hb_003506_070 Hb_001114_230--Hb_003506_070 Hb_012725_040 Hb_012725_040 Hb_001114_230--Hb_012725_040 Hb_080147_080 Hb_080147_080 Hb_001114_230--Hb_080147_080 Hb_000117_060 Hb_000117_060 Hb_012258_020--Hb_000117_060 Hb_012258_020--Hb_005568_130 Hb_041895_040 Hb_041895_040 Hb_012258_020--Hb_041895_040 Hb_003637_020 Hb_003637_020 Hb_012258_020--Hb_003637_020 Hb_000594_110 Hb_000594_110 Hb_012258_020--Hb_000594_110 Hb_001518_060 Hb_001518_060 Hb_012258_020--Hb_001518_060 Hb_000692_120 Hb_000692_120 Hb_001196_080--Hb_000692_120 Hb_001196_080--Hb_000671_060 Hb_003090_150 Hb_003090_150 Hb_001196_080--Hb_003090_150 Hb_001196_080--Hb_005054_310 Hb_002311_140 Hb_002311_140 Hb_001196_080--Hb_002311_140 Hb_003216_050 Hb_003216_050 Hb_005568_130--Hb_003216_050 Hb_001662_170 Hb_001662_170 Hb_005568_130--Hb_001662_170 Hb_000163_230 Hb_000163_230 Hb_005568_130--Hb_000163_230 Hb_002774_150 Hb_002774_150 Hb_005568_130--Hb_002774_150 Hb_004032_310 Hb_004032_310 Hb_005568_130--Hb_004032_310 Hb_003752_120 Hb_003752_120 Hb_005568_130--Hb_003752_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.194015 2.20006 0.854615 0.582292 0.601181 0.727461
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.127509 0.100179 0 0 0.188562

CAGE analysis