Hb_001899_020

Information

Type -
Description -
Location Contig1899: 65817-67541
Sequence    

Annotation

kegg
ID rcu:RCOM_0169080
description pten, putative (EC:3.1.3.67)
nr
ID XP_012084777.1
description PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 [Jatropha curcas]
swissprot
ID Q8T9S7
description Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN OS=Dictyostelium discoideum GN=pteN PE=2 SV=1
trembl
ID B9T3S6
description Pten, putative OS=Ricinus communis GN=RCOM_0169080 PE=4 SV=1
Gene Ontology
ID GO:0004725
description phosphatidylinositol -trisphosphate 3-phosphatase and dual-specificity protein phosphatase pten

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18859: 68148-71730
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001899_020 0.0 - - PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 [Jatropha curcas]
2 Hb_176819_010 0.1356195808 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
3 Hb_000419_100 0.2127361734 - - -
4 Hb_001706_030 0.2317525694 - - PREDICTED: uncharacterized protein LOC104880364 [Vitis vinifera]
5 Hb_065395_020 0.2709567638 - - receptor-kinase, putative [Ricinus communis]
6 Hb_001902_170 0.2762710357 - - PREDICTED: putative glucan endo-1,3-beta-glucosidase GVI [Nicotiana sylvestris]
7 Hb_098068_010 0.2887879556 - - PREDICTED: putative phospholipid-transporting ATPase 8 [Jatropha curcas]
8 Hb_003540_070 0.303129028 - - PREDICTED: uncharacterized protein LOC105179663 [Sesamum indicum]
9 Hb_001338_090 0.3092987221 - - hypothetical protein VITISV_009275 [Vitis vinifera]
10 Hb_185274_020 0.309776713 - - Ycf2 (chloroplast) [Andrographis paniculata]
11 Hb_007504_040 0.3177250693 - - hypothetical chloroplast RF2 [Fragaria iinumae]
12 Hb_004981_010 0.3180349857 - - -
13 Hb_143398_020 0.3208620717 - - PREDICTED: 21 kDa protein [Populus euphratica]
14 Hb_010171_010 0.3241869848 - - hypothetical protein VITISV_033646 [Vitis vinifera]
15 Hb_005399_050 0.3245240326 - - DNA-directed RNA polymerase subunit beta [Glycine soja]
16 Hb_117252_010 0.3246716414 - - hypothetical protein [Pseudomonas tolaasii]
17 Hb_042795_010 0.324718596 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
18 Hb_053575_010 0.3250102437 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
19 Hb_003401_040 0.3252184101 - - Benzoate carboxyl methyltransferase, putative [Ricinus communis]
20 Hb_011114_050 0.3254691113 - - -

Gene co-expression network

sample Hb_001899_020 Hb_001899_020 Hb_176819_010 Hb_176819_010 Hb_001899_020--Hb_176819_010 Hb_000419_100 Hb_000419_100 Hb_001899_020--Hb_000419_100 Hb_001706_030 Hb_001706_030 Hb_001899_020--Hb_001706_030 Hb_065395_020 Hb_065395_020 Hb_001899_020--Hb_065395_020 Hb_001902_170 Hb_001902_170 Hb_001899_020--Hb_001902_170 Hb_098068_010 Hb_098068_010 Hb_001899_020--Hb_098068_010 Hb_176819_010--Hb_001706_030 Hb_004981_010 Hb_004981_010 Hb_176819_010--Hb_004981_010 Hb_176819_010--Hb_065395_020 Hb_176819_010--Hb_000419_100 Hb_002224_050 Hb_002224_050 Hb_176819_010--Hb_002224_050 Hb_000419_100--Hb_001706_030 Hb_002072_050 Hb_002072_050 Hb_000419_100--Hb_002072_050 Hb_010171_010 Hb_010171_010 Hb_000419_100--Hb_010171_010 Hb_115031_010 Hb_115031_010 Hb_000419_100--Hb_115031_010 Hb_051731_010 Hb_051731_010 Hb_000419_100--Hb_051731_010 Hb_001706_030--Hb_051731_010 Hb_086993_010 Hb_086993_010 Hb_001706_030--Hb_086993_010 Hb_005656_130 Hb_005656_130 Hb_001706_030--Hb_005656_130 Hb_065395_020--Hb_004981_010 Hb_004235_020 Hb_004235_020 Hb_065395_020--Hb_004235_020 Hb_143398_020 Hb_143398_020 Hb_065395_020--Hb_143398_020 Hb_009888_010 Hb_009888_010 Hb_065395_020--Hb_009888_010 Hb_003717_020 Hb_003717_020 Hb_065395_020--Hb_003717_020 Hb_004678_070 Hb_004678_070 Hb_065395_020--Hb_004678_070 Hb_161017_020 Hb_161017_020 Hb_001902_170--Hb_161017_020 Hb_001902_170--Hb_098068_010 Hb_185274_020 Hb_185274_020 Hb_001902_170--Hb_185274_020 Hb_001338_150 Hb_001338_150 Hb_001902_170--Hb_001338_150 Hb_003032_090 Hb_003032_090 Hb_001902_170--Hb_003032_090 Hb_001338_090 Hb_001338_090 Hb_001902_170--Hb_001338_090 Hb_104735_020 Hb_104735_020 Hb_098068_010--Hb_104735_020 Hb_001300_090 Hb_001300_090 Hb_098068_010--Hb_001300_090 Hb_003540_070 Hb_003540_070 Hb_098068_010--Hb_003540_070 Hb_000012_440 Hb_000012_440 Hb_098068_010--Hb_000012_440 Hb_101733_010 Hb_101733_010 Hb_098068_010--Hb_101733_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0165989 0.0248083 0 0 0.046435
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.123967

CAGE analysis