Hb_176819_010

Information

Type -
Description -
Location Contig176819: 64-2196
Sequence    

Annotation

kegg
ID tcc:TCM_043787
description hypothetical protein
nr
ID XP_012068520.1
description PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
swissprot
ID Q99315
description Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3
trembl
ID A0A061FQA2
description Uncharacterized protein OS=Theobroma cacao GN=TCM_043787 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_176819_010 0.0 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
2 Hb_001899_020 0.1356195808 - - PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 [Jatropha curcas]
3 Hb_001706_030 0.2793972951 - - PREDICTED: uncharacterized protein LOC104880364 [Vitis vinifera]
4 Hb_004981_010 0.2973236961 - - -
5 Hb_065395_020 0.3030507822 - - receptor-kinase, putative [Ricinus communis]
6 Hb_000419_100 0.3038454435 - - -
7 Hb_002224_050 0.3217333408 - - PREDICTED: uncharacterized protein LOC104764484 isoform X1 [Camelina sativa]
8 Hb_041476_010 0.3225445962 - - PREDICTED: uncharacterized protein LOC105636643 [Jatropha curcas]
9 Hb_001758_030 0.3256601134 - - hypothetical protein JCGZ_09181 [Jatropha curcas]
10 Hb_007659_010 0.3322843306 - - PREDICTED: pentatricopeptide repeat-containing protein At4g14820 [Jatropha curcas]
11 Hb_118014_010 0.3347894189 - - PREDICTED: uncharacterized protein LOC104214283 [Nicotiana sylvestris]
12 Hb_000541_010 0.3349858854 - - polyprotein [Citrus endogenous pararetrovirus]
13 Hb_003245_010 0.336021087 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
14 Hb_165958_010 0.3361123058 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
15 Hb_117252_010 0.3470193589 - - hypothetical protein [Pseudomonas tolaasii]
16 Hb_086993_010 0.3494303151 - - -
17 Hb_143398_020 0.3496706562 - - PREDICTED: 21 kDa protein [Populus euphratica]
18 Hb_042795_010 0.3508458815 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
19 Hb_006040_040 0.3512634062 - - Putative mitochondrial protein [Glycine soja]
20 Hb_053575_010 0.354418112 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]

Gene co-expression network

sample Hb_176819_010 Hb_176819_010 Hb_001899_020 Hb_001899_020 Hb_176819_010--Hb_001899_020 Hb_001706_030 Hb_001706_030 Hb_176819_010--Hb_001706_030 Hb_004981_010 Hb_004981_010 Hb_176819_010--Hb_004981_010 Hb_065395_020 Hb_065395_020 Hb_176819_010--Hb_065395_020 Hb_000419_100 Hb_000419_100 Hb_176819_010--Hb_000419_100 Hb_002224_050 Hb_002224_050 Hb_176819_010--Hb_002224_050 Hb_001899_020--Hb_000419_100 Hb_001899_020--Hb_001706_030 Hb_001899_020--Hb_065395_020 Hb_001902_170 Hb_001902_170 Hb_001899_020--Hb_001902_170 Hb_098068_010 Hb_098068_010 Hb_001899_020--Hb_098068_010 Hb_001706_030--Hb_000419_100 Hb_051731_010 Hb_051731_010 Hb_001706_030--Hb_051731_010 Hb_086993_010 Hb_086993_010 Hb_001706_030--Hb_086993_010 Hb_005656_130 Hb_005656_130 Hb_001706_030--Hb_005656_130 Hb_003717_020 Hb_003717_020 Hb_004981_010--Hb_003717_020 Hb_004981_010--Hb_065395_020 Hb_001021_050 Hb_001021_050 Hb_004981_010--Hb_001021_050 Hb_001758_030 Hb_001758_030 Hb_004981_010--Hb_001758_030 Hb_181402_010 Hb_181402_010 Hb_004981_010--Hb_181402_010 Hb_000045_060 Hb_000045_060 Hb_004981_010--Hb_000045_060 Hb_004235_020 Hb_004235_020 Hb_065395_020--Hb_004235_020 Hb_143398_020 Hb_143398_020 Hb_065395_020--Hb_143398_020 Hb_009888_010 Hb_009888_010 Hb_065395_020--Hb_009888_010 Hb_065395_020--Hb_003717_020 Hb_004678_070 Hb_004678_070 Hb_065395_020--Hb_004678_070 Hb_002072_050 Hb_002072_050 Hb_000419_100--Hb_002072_050 Hb_010171_010 Hb_010171_010 Hb_000419_100--Hb_010171_010 Hb_115031_010 Hb_115031_010 Hb_000419_100--Hb_115031_010 Hb_000419_100--Hb_051731_010 Hb_041476_010 Hb_041476_010 Hb_002224_050--Hb_041476_010 Hb_007659_010 Hb_007659_010 Hb_002224_050--Hb_007659_010 Hb_000541_010 Hb_000541_010 Hb_002224_050--Hb_000541_010 Hb_003245_010 Hb_003245_010 Hb_002224_050--Hb_003245_010 Hb_165958_010 Hb_165958_010 Hb_002224_050--Hb_165958_010 Hb_117252_010 Hb_117252_010 Hb_002224_050--Hb_117252_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0101958 0.00916561 0 0 0.0351392
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0463611

CAGE analysis