Hb_001821_030

Information

Type -
Description -
Location Contig1821: 21884-30332
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa001798mg
description hypothetical protein
nr
ID KDP32432.1
description hypothetical protein JCGZ_13357 [Jatropha curcas]
swissprot
ID O65351
description Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana GN=SBT1.7 PE=1 SV=1
trembl
ID A0A067K8J5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13357 PE=4 SV=1
Gene Ontology
ID GO:0005618
description subtilisin-like protease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17722: 27587-30035
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001821_030 0.0 - - hypothetical protein JCGZ_13357 [Jatropha curcas]
2 Hb_001369_530 0.0979934656 - - 21 kDa protein precursor, putative [Ricinus communis]
3 Hb_006314_020 0.112448433 - - PREDICTED: GABA transporter 1-like [Jatropha curcas]
4 Hb_000521_350 0.1160241677 - - unnamed protein product [Vitis vinifera]
5 Hb_148817_010 0.1167153559 - - PREDICTED: CASP-like protein 1D1 [Jatropha curcas]
6 Hb_004875_040 0.1234513944 - - PREDICTED: uncharacterized protein LOC105645797 [Jatropha curcas]
7 Hb_000081_030 0.1238170777 - - BnaC09g05810D [Brassica napus]
8 Hb_128582_010 0.1303766808 - - -
9 Hb_003371_040 0.1305135028 - - PREDICTED: uncharacterized protein LOC105650327 [Jatropha curcas]
10 Hb_002289_110 0.1308982746 - - PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 [Jatropha curcas]
11 Hb_000230_160 0.1312142945 - - PREDICTED: uncharacterized protein LOC105631858 isoform X1 [Jatropha curcas]
12 Hb_001856_150 0.1321997723 - - -
13 Hb_000059_110 0.1345335124 transcription factor TF Family: MYB MYB transcriptional factor [Populus tremula x Populus tremuloides]
14 Hb_028008_030 0.1378801338 - - probable xyloglucan endotransglucosylase/hydrolase protein 23 precursor [Malus domestica]
15 Hb_001998_260 0.1380021161 - - cytochrome P450, putative [Ricinus communis]
16 Hb_001799_090 0.1457856461 - - PREDICTED: uclacyanin-2-like [Jatropha curcas]
17 Hb_000098_210 0.1479725972 - - PREDICTED: uncharacterized protein LOC105633345 [Jatropha curcas]
18 Hb_000297_220 0.1481170351 - - SAUR family protein [Theobroma cacao]
19 Hb_000286_030 0.1488917232 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
20 Hb_000032_330 0.1494150187 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001821_030 Hb_001821_030 Hb_001369_530 Hb_001369_530 Hb_001821_030--Hb_001369_530 Hb_006314_020 Hb_006314_020 Hb_001821_030--Hb_006314_020 Hb_000521_350 Hb_000521_350 Hb_001821_030--Hb_000521_350 Hb_148817_010 Hb_148817_010 Hb_001821_030--Hb_148817_010 Hb_004875_040 Hb_004875_040 Hb_001821_030--Hb_004875_040 Hb_000081_030 Hb_000081_030 Hb_001821_030--Hb_000081_030 Hb_000270_550 Hb_000270_550 Hb_001369_530--Hb_000270_550 Hb_012395_150 Hb_012395_150 Hb_001369_530--Hb_012395_150 Hb_012879_010 Hb_012879_010 Hb_001369_530--Hb_012879_010 Hb_179118_010 Hb_179118_010 Hb_001369_530--Hb_179118_010 Hb_183820_010 Hb_183820_010 Hb_001369_530--Hb_183820_010 Hb_001856_150 Hb_001856_150 Hb_006314_020--Hb_001856_150 Hb_003371_040 Hb_003371_040 Hb_006314_020--Hb_003371_040 Hb_000230_160 Hb_000230_160 Hb_006314_020--Hb_000230_160 Hb_003171_070 Hb_003171_070 Hb_006314_020--Hb_003171_070 Hb_006314_020--Hb_148817_010 Hb_006314_020--Hb_000081_030 Hb_161981_010 Hb_161981_010 Hb_000521_350--Hb_161981_010 Hb_086122_030 Hb_086122_030 Hb_000521_350--Hb_086122_030 Hb_000521_350--Hb_148817_010 Hb_060272_010 Hb_060272_010 Hb_000521_350--Hb_060272_010 Hb_000059_110 Hb_000059_110 Hb_000521_350--Hb_000059_110 Hb_095532_010 Hb_095532_010 Hb_148817_010--Hb_095532_010 Hb_148817_010--Hb_000081_030 Hb_148817_010--Hb_004875_040 Hb_000032_330 Hb_000032_330 Hb_148817_010--Hb_000032_330 Hb_020805_110 Hb_020805_110 Hb_004875_040--Hb_020805_110 Hb_004875_040--Hb_001856_150 Hb_000098_210 Hb_000098_210 Hb_004875_040--Hb_000098_210 Hb_000676_380 Hb_000676_380 Hb_004875_040--Hb_000676_380 Hb_004875_040--Hb_006314_020 Hb_000081_030--Hb_000230_160 Hb_000286_030 Hb_000286_030 Hb_000081_030--Hb_000286_030 Hb_000761_030 Hb_000761_030 Hb_000081_030--Hb_000761_030 Hb_000081_030--Hb_001856_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0655085 3.0775 0.328317 8.56432 0.0996374 0.0340121
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 6.0312 0.230109

CAGE analysis