Hb_001332_030

Information

Type -
Description -
Location Contig1332: 33629-47733
Sequence    

Annotation

kegg
ID rcu:RCOM_0769480
description kinesin heavy chain, putative
nr
ID KDP26078.1
description hypothetical protein JCGZ_21111 [Jatropha curcas]
swissprot
ID O81635
description Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2
trembl
ID A0A067JTB8
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_21111 PE=3 SV=1
Gene Ontology
ID GO:0015630
description kinesin kp1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09470: 46478-47659
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001332_030 0.0 - - hypothetical protein JCGZ_21111 [Jatropha curcas]
2 Hb_004116_100 0.2024838951 - - Isoamyl acetate-hydrolyzing esterase, putative [Ricinus communis]
3 Hb_011512_160 0.2305029429 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000723_340 0.2658142712 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Jatropha curcas]
5 Hb_000740_040 0.2819725085 - - PREDICTED: uncharacterized protein LOC105126082 [Populus euphratica]
6 Hb_006275_060 0.2823288824 - - hypothetical protein CARUB_v10021660mg, partial [Capsella rubella]
7 Hb_000173_050 0.2828115204 - - basic 7S globulin 2 precursor small subunit, putative [Ricinus communis]
8 Hb_003126_130 0.286494919 - - inositol-1-monophosphatase family protein [Populus trichocarpa]
9 Hb_027472_110 0.291696591 - - Patellin-4, putative [Ricinus communis]
10 Hb_001632_030 0.2927007523 - - PREDICTED: chaperone protein ClpB1 [Jatropha curcas]
11 Hb_118282_010 0.2957075486 - - PREDICTED: uncharacterized protein LOC105108358 [Populus euphratica]
12 Hb_030627_070 0.2964743951 - - histone H4 [Zea mays]
13 Hb_002045_190 0.2996132815 - - PREDICTED: histone H2A variant 1 [Jatropha curcas]
14 Hb_000181_190 0.3008042244 - - PREDICTED: probable protein phosphatase 2C 39 [Jatropha curcas]
15 Hb_000155_150 0.3020234192 - - hypothetical protein CARUB_v10021660mg, partial [Capsella rubella]
16 Hb_068194_010 0.3044261958 - - hypothetical protein POPTR_0010s23740g [Populus trichocarpa]
17 Hb_001073_080 0.3046220628 - - PREDICTED: protein root UVB sensitive 2, chloroplastic [Jatropha curcas]
18 Hb_000175_190 0.3050422714 - - PREDICTED: phosphatidylcholine:diacylglycerol cholinephosphotransferase 1-like [Jatropha curcas]
19 Hb_000594_070 0.3053463776 transcription factor TF Family: G2-like DNA binding protein, putative [Ricinus communis]
20 Hb_006970_140 0.3067290709 - - PREDICTED: histone H3.2-like [Solanum lycopersicum]

Gene co-expression network

sample Hb_001332_030 Hb_001332_030 Hb_004116_100 Hb_004116_100 Hb_001332_030--Hb_004116_100 Hb_011512_160 Hb_011512_160 Hb_001332_030--Hb_011512_160 Hb_000723_340 Hb_000723_340 Hb_001332_030--Hb_000723_340 Hb_000740_040 Hb_000740_040 Hb_001332_030--Hb_000740_040 Hb_006275_060 Hb_006275_060 Hb_001332_030--Hb_006275_060 Hb_000173_050 Hb_000173_050 Hb_001332_030--Hb_000173_050 Hb_030627_070 Hb_030627_070 Hb_004116_100--Hb_030627_070 Hb_004116_100--Hb_000740_040 Hb_003077_150 Hb_003077_150 Hb_004116_100--Hb_003077_150 Hb_118282_010 Hb_118282_010 Hb_004116_100--Hb_118282_010 Hb_002045_190 Hb_002045_190 Hb_004116_100--Hb_002045_190 Hb_068194_010 Hb_068194_010 Hb_004116_100--Hb_068194_010 Hb_003055_110 Hb_003055_110 Hb_011512_160--Hb_003055_110 Hb_011512_160--Hb_004116_100 Hb_089889_010 Hb_089889_010 Hb_011512_160--Hb_089889_010 Hb_000008_380 Hb_000008_380 Hb_011512_160--Hb_000008_380 Hb_011512_160--Hb_000740_040 Hb_011512_160--Hb_068194_010 Hb_000175_190 Hb_000175_190 Hb_000723_340--Hb_000175_190 Hb_027298_030 Hb_027298_030 Hb_000723_340--Hb_027298_030 Hb_002374_300 Hb_002374_300 Hb_000723_340--Hb_002374_300 Hb_007894_050 Hb_007894_050 Hb_000723_340--Hb_007894_050 Hb_003126_130 Hb_003126_130 Hb_000723_340--Hb_003126_130 Hb_003181_060 Hb_003181_060 Hb_000723_340--Hb_003181_060 Hb_001073_080 Hb_001073_080 Hb_000740_040--Hb_001073_080 Hb_000740_040--Hb_118282_010 Hb_001329_090 Hb_001329_090 Hb_000740_040--Hb_001329_090 Hb_000005_110 Hb_000005_110 Hb_000740_040--Hb_000005_110 Hb_000035_240 Hb_000035_240 Hb_000740_040--Hb_000035_240 Hb_000740_040--Hb_003126_130 Hb_002307_020 Hb_002307_020 Hb_006275_060--Hb_002307_020 Hb_000155_150 Hb_000155_150 Hb_006275_060--Hb_000155_150 Hb_006275_060--Hb_002045_190 Hb_003784_040 Hb_003784_040 Hb_006275_060--Hb_003784_040 Hb_003399_100 Hb_003399_100 Hb_006275_060--Hb_003399_100 Hb_005725_150 Hb_005725_150 Hb_006275_060--Hb_005725_150 Hb_006970_140 Hb_006970_140 Hb_000173_050--Hb_006970_140 Hb_002909_020 Hb_002909_020 Hb_000173_050--Hb_002909_020 Hb_003178_020 Hb_003178_020 Hb_000173_050--Hb_003178_020 Hb_000173_050--Hb_003126_130 Hb_000173_050--Hb_000740_040 Hb_002249_070 Hb_002249_070 Hb_000173_050--Hb_002249_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.436894 0.0521655 0 0.021283
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.257884 0.173934 0.055219 0.0921195 0.0615648

CAGE analysis