Hb_001103_080

Information

Type -
Description -
Location Contig1103: 130851-131555
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001103_080 0.0 - - -
2 Hb_004884_030 0.1981820484 - - PREDICTED: ammonium transporter 3 member 3 [Vitis vinifera]
3 Hb_000130_190 0.2010303867 - - PREDICTED: uncharacterized protein LOC105638437 [Jatropha curcas]
4 Hb_003814_030 0.2044029391 - - PREDICTED: WAT1-related protein At5g47470-like isoform X2 [Jatropha curcas]
5 Hb_001546_070 0.2152411579 - - Uncharacterized protein F383_19872 [Gossypium arboreum]
6 Hb_008029_020 0.2229540909 - - PREDICTED: uncharacterized protein LOC105631777 [Jatropha curcas]
7 Hb_002235_120 0.2241424364 - - hypothetical protein B456_002G103400 [Gossypium raimondii]
8 Hb_000505_110 0.2272796378 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump [Jatropha curcas]
9 Hb_001301_090 0.2294996075 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001882_110 0.2296796543 transcription factor TF Family: mTERF conserved hypothetical protein [Ricinus communis]
11 Hb_001031_040 0.2319121827 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000062_030 0.2407774519 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X2 [Jatropha curcas]
13 Hb_003894_040 0.2409958779 - - nucleotide binding protein, putative [Ricinus communis]
14 Hb_001117_160 0.2426893141 - - PREDICTED: pentatricopeptide repeat-containing protein At1g10270 [Jatropha curcas]
15 Hb_000599_170 0.244103543 - - PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like isoform X2 [Populus euphratica]
16 Hb_001114_090 0.2446866187 - - PREDICTED: magnesium-dependent phosphatase 1 [Jatropha curcas]
17 Hb_000136_190 0.2447886392 - - PREDICTED: protein-S-isoprenylcysteine O-methyltransferase A-like isoform X1 [Jatropha curcas]
18 Hb_000087_030 0.2448607303 - - hypothetical protein JCGZ_02243 [Jatropha curcas]
19 Hb_001508_020 0.2454083586 - - myosin vIII, putative [Ricinus communis]
20 Hb_004770_050 0.2465637446 - - PREDICTED: serine carboxypeptidase-like 35 [Populus euphratica]

Gene co-expression network

sample Hb_001103_080 Hb_001103_080 Hb_004884_030 Hb_004884_030 Hb_001103_080--Hb_004884_030 Hb_000130_190 Hb_000130_190 Hb_001103_080--Hb_000130_190 Hb_003814_030 Hb_003814_030 Hb_001103_080--Hb_003814_030 Hb_001546_070 Hb_001546_070 Hb_001103_080--Hb_001546_070 Hb_008029_020 Hb_008029_020 Hb_001103_080--Hb_008029_020 Hb_002235_120 Hb_002235_120 Hb_001103_080--Hb_002235_120 Hb_027380_230 Hb_027380_230 Hb_004884_030--Hb_027380_230 Hb_000482_150 Hb_000482_150 Hb_004884_030--Hb_000482_150 Hb_167973_010 Hb_167973_010 Hb_004884_030--Hb_167973_010 Hb_004701_050 Hb_004701_050 Hb_004884_030--Hb_004701_050 Hb_006355_020 Hb_006355_020 Hb_004884_030--Hb_006355_020 Hb_000376_060 Hb_000376_060 Hb_004884_030--Hb_000376_060 Hb_009119_030 Hb_009119_030 Hb_000130_190--Hb_009119_030 Hb_028707_080 Hb_028707_080 Hb_000130_190--Hb_028707_080 Hb_004935_080 Hb_004935_080 Hb_000130_190--Hb_004935_080 Hb_002320_070 Hb_002320_070 Hb_000130_190--Hb_002320_070 Hb_000130_190--Hb_008029_020 Hb_019053_020 Hb_019053_020 Hb_000130_190--Hb_019053_020 Hb_000136_190 Hb_000136_190 Hb_003814_030--Hb_000136_190 Hb_000330_160 Hb_000330_160 Hb_003814_030--Hb_000330_160 Hb_001508_020 Hb_001508_020 Hb_003814_030--Hb_001508_020 Hb_004657_090 Hb_004657_090 Hb_003814_030--Hb_004657_090 Hb_005144_030 Hb_005144_030 Hb_003814_030--Hb_005144_030 Hb_006508_030 Hb_006508_030 Hb_003814_030--Hb_006508_030 Hb_000692_150 Hb_000692_150 Hb_001546_070--Hb_000692_150 Hb_001114_090 Hb_001114_090 Hb_001546_070--Hb_001114_090 Hb_001546_070--Hb_028707_080 Hb_000960_040 Hb_000960_040 Hb_001546_070--Hb_000960_040 Hb_162275_040 Hb_162275_040 Hb_001546_070--Hb_162275_040 Hb_000347_560 Hb_000347_560 Hb_001546_070--Hb_000347_560 Hb_051437_010 Hb_051437_010 Hb_008029_020--Hb_051437_010 Hb_008029_020--Hb_002235_120 Hb_051424_010 Hb_051424_010 Hb_008029_020--Hb_051424_010 Hb_008029_020--Hb_019053_020 Hb_008029_020--Hb_001508_020 Hb_005408_020 Hb_005408_020 Hb_002235_120--Hb_005408_020 Hb_004376_030 Hb_004376_030 Hb_002235_120--Hb_004376_030 Hb_005462_020 Hb_005462_020 Hb_002235_120--Hb_005462_020 Hb_002235_120--Hb_002320_070 Hb_002903_080 Hb_002903_080 Hb_002235_120--Hb_002903_080 Hb_003436_050 Hb_003436_050 Hb_002235_120--Hb_003436_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.774204 1.46619 1.8322 2.48616 3.85344 3.40371
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 1.11725 0 1.39059 1.63298

CAGE analysis