Hb_000976_040

Information

Type -
Description -
Location Contig976: 56419-67914
Sequence    

Annotation

kegg
ID rcu:RCOM_1575730
description molybdopterin cofactor sulfurase, putative (EC:2.8.1.7)
nr
ID XP_002513397.1
description molybdopterin cofactor sulfurase, putative [Ricinus communis]
swissprot
ID Q8LGM7
description Molybdenum cofactor sulfurase OS=Solanum lycopersicum GN=FLACCA PE=2 SV=1
trembl
ID B9RI28
description Molybdenum cofactor sulfurase OS=Ricinus communis GN=RCOM_1575730 PE=3 SV=1
Gene Ontology
ID GO:0008265
description molybdenum cofactor sulfurase isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64044: 56448-56982 , PASA_asmbl_64045: 59338-59970 , PASA_asmbl_64046: 63079-64169
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000976_040 0.0 - - molybdopterin cofactor sulfurase, putative [Ricinus communis]
2 Hb_000853_120 0.0801972594 - - PREDICTED: ethylene response sensor 1 [Jatropha curcas]
3 Hb_000200_280 0.0829968564 - - PREDICTED: uncharacterized protein LOC105636924 [Jatropha curcas]
4 Hb_011512_090 0.0863360033 - - Hydroxyethylthiazole kinase, putative [Ricinus communis]
5 Hb_156850_070 0.0950687447 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000640_130 0.0998064644 transcription factor TF Family: SET unnamed protein product [Vitis vinifera]
7 Hb_005143_030 0.1017351326 - - PREDICTED: uncharacterized protein LOC105638843 [Jatropha curcas]
8 Hb_000740_110 0.1080686095 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01850 [Jatropha curcas]
9 Hb_005214_090 0.1090120671 - - PREDICTED: uncharacterized protein LOC105636015 [Jatropha curcas]
10 Hb_000244_220 0.1103513746 - - PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic-like [Jatropha curcas]
11 Hb_002163_010 0.1112787599 - - PREDICTED: UBA and UBX domain-containing protein At4g15410 [Jatropha curcas]
12 Hb_001575_010 0.1129715421 - - PREDICTED: pumilio homolog 6, chloroplastic isoform X1 [Jatropha curcas]
13 Hb_000327_340 0.1152822848 - - PREDICTED: ankyrin repeat-containing protein At3g12360 [Jatropha curcas]
14 Hb_002110_030 0.1153487527 - - PREDICTED: WD and tetratricopeptide repeats protein 1 isoform X3 [Jatropha curcas]
15 Hb_001416_020 0.1170000854 - - H(\+)-transporting atpase plant/fungi plasma membrane type, putative [Ricinus communis]
16 Hb_000215_100 0.1177156448 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000369_130 0.1191183094 - - PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Jatropha curcas]
18 Hb_001621_130 0.1191545726 - - PREDICTED: pumilio homolog 1-like isoform X1 [Jatropha curcas]
19 Hb_000140_480 0.1197328795 - - PREDICTED: uncharacterized protein LOC105637350 [Jatropha curcas]
20 Hb_089140_030 0.1205941768 - - PREDICTED: thiol protease aleurain-like [Jatropha curcas]

Gene co-expression network

sample Hb_000976_040 Hb_000976_040 Hb_000853_120 Hb_000853_120 Hb_000976_040--Hb_000853_120 Hb_000200_280 Hb_000200_280 Hb_000976_040--Hb_000200_280 Hb_011512_090 Hb_011512_090 Hb_000976_040--Hb_011512_090 Hb_156850_070 Hb_156850_070 Hb_000976_040--Hb_156850_070 Hb_000640_130 Hb_000640_130 Hb_000976_040--Hb_000640_130 Hb_005143_030 Hb_005143_030 Hb_000976_040--Hb_005143_030 Hb_002110_030 Hb_002110_030 Hb_000853_120--Hb_002110_030 Hb_000853_120--Hb_156850_070 Hb_000836_270 Hb_000836_270 Hb_000853_120--Hb_000836_270 Hb_000244_220 Hb_000244_220 Hb_000853_120--Hb_000244_220 Hb_009701_010 Hb_009701_010 Hb_000853_120--Hb_009701_010 Hb_002827_020 Hb_002827_020 Hb_000200_280--Hb_002827_020 Hb_089140_030 Hb_089140_030 Hb_000200_280--Hb_089140_030 Hb_011716_090 Hb_011716_090 Hb_000200_280--Hb_011716_090 Hb_000200_280--Hb_011512_090 Hb_000200_280--Hb_002110_030 Hb_011512_090--Hb_002110_030 Hb_002400_400 Hb_002400_400 Hb_011512_090--Hb_002400_400 Hb_002005_090 Hb_002005_090 Hb_011512_090--Hb_002005_090 Hb_001621_130 Hb_001621_130 Hb_011512_090--Hb_001621_130 Hb_000622_250 Hb_000622_250 Hb_156850_070--Hb_000622_250 Hb_000740_110 Hb_000740_110 Hb_156850_070--Hb_000740_110 Hb_156850_070--Hb_005143_030 Hb_005214_090 Hb_005214_090 Hb_156850_070--Hb_005214_090 Hb_000627_180 Hb_000627_180 Hb_156850_070--Hb_000627_180 Hb_000215_100 Hb_000215_100 Hb_000640_130--Hb_000215_100 Hb_001416_020 Hb_001416_020 Hb_000640_130--Hb_001416_020 Hb_000640_130--Hb_002005_090 Hb_000640_130--Hb_011716_090 Hb_000521_170 Hb_000521_170 Hb_000640_130--Hb_000521_170 Hb_001575_010 Hb_001575_010 Hb_005143_030--Hb_001575_010 Hb_028487_010 Hb_028487_010 Hb_005143_030--Hb_028487_010 Hb_002107_070 Hb_002107_070 Hb_005143_030--Hb_002107_070 Hb_000369_130 Hb_000369_130 Hb_005143_030--Hb_000369_130 Hb_001821_090 Hb_001821_090 Hb_005143_030--Hb_001821_090 Hb_003498_120 Hb_003498_120 Hb_005143_030--Hb_003498_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.05696 4.96702 0.830406 1.96844 4.08012 3.1559
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.92107 1.73323 1.56702 5.54524 1.13722

CAGE analysis