Hb_089140_030

Information

Type -
Description -
Location Contig89140: 27938-32746
Sequence    

Annotation

kegg
ID rcu:RCOM_0711880
description cysteine protease, putative (EC:3.4.22.16)
nr
ID XP_012077053.1
description PREDICTED: thiol protease aleurain-like [Jatropha curcas]
swissprot
ID Q8RWQ9
description Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1
trembl
ID A0A067KCP8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07488 PE=3 SV=1
Gene Ontology
ID GO:0008234
description thiol protease aleurain-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61661: 28067-32655
cDNA
(Sanger)
(ID:Location)		 010_N12.ab1: 32384-32655

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_089140_030 0.0 - - PREDICTED: thiol protease aleurain-like [Jatropha curcas]
2 Hb_000200_280 0.0966815785 - - PREDICTED: uncharacterized protein LOC105636924 [Jatropha curcas]
3 Hb_011716_090 0.098382258 transcription factor TF Family: HRT putative transciption factor family protein [Populus trichocarpa]
4 Hb_000740_110 0.0986346589 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01850 [Jatropha curcas]
5 Hb_005214_090 0.0992374467 - - PREDICTED: uncharacterized protein LOC105636015 [Jatropha curcas]
6 Hb_001575_010 0.1032456848 - - PREDICTED: pumilio homolog 6, chloroplastic isoform X1 [Jatropha curcas]
7 Hb_000627_180 0.109564507 - - conserved hypothetical protein [Ricinus communis]
8 Hb_156850_070 0.113660862 - - conserved hypothetical protein [Ricinus communis]
9 Hb_008494_010 0.1201909634 - - PREDICTED: uncharacterized protein LOC105636015 [Jatropha curcas]
10 Hb_005143_030 0.1204266452 - - PREDICTED: uncharacterized protein LOC105638843 [Jatropha curcas]
11 Hb_000976_040 0.1205941768 - - molybdopterin cofactor sulfurase, putative [Ricinus communis]
12 Hb_002110_030 0.1206122638 - - PREDICTED: WD and tetratricopeptide repeats protein 1 isoform X3 [Jatropha curcas]
13 Hb_008143_070 0.1210847784 - - PREDICTED: factor of DNA methylation 4 [Jatropha curcas]
14 Hb_000069_410 0.1245412814 - - PREDICTED: protein SDE2 homolog [Jatropha curcas]
15 Hb_000327_340 0.1249015543 - - PREDICTED: ankyrin repeat-containing protein At3g12360 [Jatropha curcas]
16 Hb_000622_250 0.1251024761 - - atpob1, putative [Ricinus communis]
17 Hb_001913_060 0.125307353 - - PREDICTED: splicing factor 3B subunit 3-like [Jatropha curcas]
18 Hb_000640_130 0.1258286842 transcription factor TF Family: SET unnamed protein product [Vitis vinifera]
19 Hb_006831_040 0.1263662757 - - PREDICTED: enhancer of mRNA-decapping protein 4-like isoform X1 [Jatropha curcas]
20 Hb_002007_240 0.1264513619 - - PREDICTED: F-box protein At1g55000 [Jatropha curcas]

Gene co-expression network

sample Hb_089140_030 Hb_089140_030 Hb_000200_280 Hb_000200_280 Hb_089140_030--Hb_000200_280 Hb_011716_090 Hb_011716_090 Hb_089140_030--Hb_011716_090 Hb_000740_110 Hb_000740_110 Hb_089140_030--Hb_000740_110 Hb_005214_090 Hb_005214_090 Hb_089140_030--Hb_005214_090 Hb_001575_010 Hb_001575_010 Hb_089140_030--Hb_001575_010 Hb_000627_180 Hb_000627_180 Hb_089140_030--Hb_000627_180 Hb_000976_040 Hb_000976_040 Hb_000200_280--Hb_000976_040 Hb_002827_020 Hb_002827_020 Hb_000200_280--Hb_002827_020 Hb_000200_280--Hb_011716_090 Hb_011512_090 Hb_011512_090 Hb_000200_280--Hb_011512_090 Hb_002110_030 Hb_002110_030 Hb_000200_280--Hb_002110_030 Hb_002693_060 Hb_002693_060 Hb_011716_090--Hb_002693_060 Hb_000640_130 Hb_000640_130 Hb_011716_090--Hb_000640_130 Hb_011716_090--Hb_002827_020 Hb_003211_010 Hb_003211_010 Hb_011716_090--Hb_003211_010 Hb_156850_070 Hb_156850_070 Hb_000740_110--Hb_156850_070 Hb_000740_110--Hb_000976_040 Hb_008143_070 Hb_008143_070 Hb_000740_110--Hb_008143_070 Hb_006588_150 Hb_006588_150 Hb_000740_110--Hb_006588_150 Hb_000740_110--Hb_005214_090 Hb_000856_310 Hb_000856_310 Hb_005214_090--Hb_000856_310 Hb_000244_220 Hb_000244_220 Hb_005214_090--Hb_000244_220 Hb_005214_090--Hb_001575_010 Hb_005214_090--Hb_000627_180 Hb_005214_090--Hb_156850_070 Hb_000069_410 Hb_000069_410 Hb_001575_010--Hb_000069_410 Hb_005143_030 Hb_005143_030 Hb_001575_010--Hb_005143_030 Hb_001821_090 Hb_001821_090 Hb_001575_010--Hb_001821_090 Hb_028487_010 Hb_028487_010 Hb_001575_010--Hb_028487_010 Hb_002170_050 Hb_002170_050 Hb_001575_010--Hb_002170_050 Hb_011173_030 Hb_011173_030 Hb_001575_010--Hb_011173_030 Hb_000622_250 Hb_000622_250 Hb_000627_180--Hb_000622_250 Hb_000236_410 Hb_000236_410 Hb_000627_180--Hb_000236_410 Hb_000627_180--Hb_000069_410 Hb_002636_180 Hb_002636_180 Hb_000627_180--Hb_002636_180 Hb_000925_160 Hb_000925_160 Hb_000627_180--Hb_000925_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
81.3575 175.689 15.3463 74.6258 119.519 118.549
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
80.3501 23.0574 72.5532 166.709 45.3987

CAGE analysis