Hb_000763_030

Information

Type -
Description -
Location Contig763: 46199-47747
Sequence    

Annotation

kegg
ID rcu:RCOM_0623340
description Taxadien-5-alpha-ol O-acetyltransferase, putative (EC:2.3.1.144)
nr
ID XP_002529384.1
description Taxadien-5-alpha-ol O-acetyltransferase, putative [Ricinus communis]
swissprot
ID Q94CD1
description Omega-hydroxypalmitate O-feruloyl transferase OS=Arabidopsis thaliana GN=HHT1 PE=1 SV=1
trembl
ID B9STR5
description Taxadien-5-alpha-ol O-acetyltransferase, putative OS=Ricinus communis GN=RCOM_0623340 PE=4 SV=1
Gene Ontology
ID GO:0016747
description hydroxycinnamoyl- shikimate quinate hydroxycinnamoyl transferase isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57323: 45995-48012
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000763_030 0.0 - - Taxadien-5-alpha-ol O-acetyltransferase, putative [Ricinus communis]
2 Hb_007120_020 0.1318397565 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001061_010 0.1406153461 - - PREDICTED: uncharacterized protein LOC100243595 [Vitis vinifera]
4 Hb_001952_100 0.143862275 - - PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member 2-like [Jatropha curcas]
5 Hb_000083_280 0.1445738399 - - copper ion binding protein, putative [Ricinus communis]
6 Hb_006332_030 0.1498815195 - - RecName: Full=Valine N-monooxygenase 1; AltName: Full=Cytochrome P450 79D1 [Manihot esculenta]
7 Hb_113974_010 0.1525531585 - - DNA binding protein, putative [Ricinus communis]
8 Hb_011859_010 0.1533756907 - - hypothetical protein VITISV_027923 [Vitis vinifera]
9 Hb_039812_010 0.1550883649 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Jatropha curcas]
10 Hb_001564_100 0.156222693 - - Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
11 Hb_011218_020 0.1577450075 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000675_130 0.1595345552 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like isoform X2 [Jatropha curcas]
13 Hb_000748_100 0.1600471486 - - hypothetical protein POPTR_0002s06160g [Populus trichocarpa]
14 Hb_028995_020 0.1601384391 - - PREDICTED: uncharacterized protein LOC105642143 [Jatropha curcas]
15 Hb_003641_040 0.1603246568 - - hypothetical protein POPTR_0006s14010g [Populus trichocarpa]
16 Hb_003464_040 0.1626756203 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
17 Hb_012368_040 0.1629186971 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001123_180 0.1631570902 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_004117_240 0.1639255515 - - protease inhibitor/seed storage/ltp family [Cicer arietinum]
20 Hb_002453_040 0.164011964 - - PREDICTED: uncharacterized protein LOC105636487 [Jatropha curcas]

Gene co-expression network

sample Hb_000763_030 Hb_000763_030 Hb_007120_020 Hb_007120_020 Hb_000763_030--Hb_007120_020 Hb_001061_010 Hb_001061_010 Hb_000763_030--Hb_001061_010 Hb_001952_100 Hb_001952_100 Hb_000763_030--Hb_001952_100 Hb_000083_280 Hb_000083_280 Hb_000763_030--Hb_000083_280 Hb_006332_030 Hb_006332_030 Hb_000763_030--Hb_006332_030 Hb_113974_010 Hb_113974_010 Hb_000763_030--Hb_113974_010 Hb_007120_020--Hb_001952_100 Hb_000227_010 Hb_000227_010 Hb_007120_020--Hb_000227_010 Hb_004722_050 Hb_004722_050 Hb_007120_020--Hb_004722_050 Hb_001926_050 Hb_001926_050 Hb_007120_020--Hb_001926_050 Hb_000514_010 Hb_000514_010 Hb_007120_020--Hb_000514_010 Hb_001519_080 Hb_001519_080 Hb_001061_010--Hb_001519_080 Hb_008642_020 Hb_008642_020 Hb_001061_010--Hb_008642_020 Hb_001061_010--Hb_001952_100 Hb_007558_060 Hb_007558_060 Hb_001061_010--Hb_007558_060 Hb_000005_390 Hb_000005_390 Hb_001061_010--Hb_000005_390 Hb_011218_020 Hb_011218_020 Hb_001061_010--Hb_011218_020 Hb_000155_280 Hb_000155_280 Hb_001952_100--Hb_000155_280 Hb_006485_020 Hb_006485_020 Hb_001952_100--Hb_006485_020 Hb_017959_020 Hb_017959_020 Hb_001952_100--Hb_017959_020 Hb_002026_040 Hb_002026_040 Hb_001952_100--Hb_002026_040 Hb_002376_020 Hb_002376_020 Hb_001952_100--Hb_002376_020 Hb_002843_200 Hb_002843_200 Hb_001952_100--Hb_002843_200 Hb_039812_010 Hb_039812_010 Hb_000083_280--Hb_039812_010 Hb_004422_030 Hb_004422_030 Hb_000083_280--Hb_004422_030 Hb_000527_030 Hb_000527_030 Hb_000083_280--Hb_000527_030 Hb_000283_090 Hb_000283_090 Hb_000083_280--Hb_000283_090 Hb_000083_280--Hb_113974_010 Hb_004007_080 Hb_004007_080 Hb_000083_280--Hb_004007_080 Hb_006332_030--Hb_011218_020 Hb_028995_020 Hb_028995_020 Hb_006332_030--Hb_028995_020 Hb_011859_010 Hb_011859_010 Hb_006332_030--Hb_011859_010 Hb_012368_040 Hb_012368_040 Hb_006332_030--Hb_012368_040 Hb_003464_040 Hb_003464_040 Hb_006332_030--Hb_003464_040 Hb_000563_110 Hb_000563_110 Hb_006332_030--Hb_000563_110 Hb_003641_040 Hb_003641_040 Hb_113974_010--Hb_003641_040 Hb_000160_110 Hb_000160_110 Hb_113974_010--Hb_000160_110 Hb_004241_160 Hb_004241_160 Hb_113974_010--Hb_004241_160 Hb_008226_050 Hb_008226_050 Hb_113974_010--Hb_008226_050 Hb_113974_010--Hb_000527_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.89127 0.1332 33.8173 7.70185 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.28416

CAGE analysis