Hb_000514_010

Information

Type -
Description -
Location Contig514: 12840-14705
Sequence    

Annotation

kegg
ID rcu:RCOM_0927500
description monooxygenase, putative (EC:1.14.13.8)
nr
ID XP_012078643.1
description PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA4 [Jatropha curcas]
swissprot
ID Q9LFM5
description Probable indole-3-pyruvate monooxygenase YUCCA4 OS=Arabidopsis thaliana GN=YUC4 PE=1 SV=1
trembl
ID A0A067KKG2
description Flavin-containing monooxygenase OS=Jatropha curcas GN=JCGZ_13224 PE=3 SV=1
Gene Ontology
ID GO:0004499
description probable indole-3-pyruvate monooxygenase yucca4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000514_010 0.0 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA4 [Jatropha curcas]
2 Hb_001171_020 0.0054108856 - - PREDICTED: gibberellin 3-beta-dioxygenase 3-like [Citrus sinensis]
3 Hb_001372_010 0.0084440563 - - ankyrin repeat-containing protein, putative [Ricinus communis]
4 Hb_004598_010 0.0087718581 - - PREDICTED: 11-beta-hydroxysteroid dehydrogenase-like 5 [Jatropha curcas]
5 Hb_182291_010 0.0099953803 - - hypothetical protein CICLE_v10029654mg [Citrus clementina]
6 Hb_004722_050 0.0107965781 - - hypothetical protein POPTR_0011s02010g [Populus trichocarpa]
7 Hb_002049_040 0.0110675007 - - PREDICTED: protein UNUSUAL FLORAL ORGANS [Jatropha curcas]
8 Hb_006953_010 0.0131496769 - - cytochrome P450, putative [Ricinus communis]
9 Hb_107495_020 0.0159541456 - - PREDICTED: GDSL esterase/lipase At1g71691 [Jatropha curcas]
10 Hb_001536_070 0.0166970287 - - hypothetical protein JCGZ_20053 [Jatropha curcas]
11 Hb_000265_040 0.0168122859 - - PREDICTED: subtilisin-like protease, partial [Prunus mume]
12 Hb_001926_050 0.0207346083 - - PREDICTED: peroxidase 19 [Jatropha curcas]
13 Hb_075653_010 0.0208230936 - - PREDICTED: tyrosine decarboxylase 1-like [Jatropha curcas]
14 Hb_002305_040 0.0217971684 - - TMV resistance protein N, putative [Ricinus communis]
15 Hb_004228_050 0.0273968175 - - PREDICTED: tubulin beta chain-like [Jatropha curcas]
16 Hb_000592_150 0.0283301328 - - Os05g0413200 [Oryza sativa Japonica Group]
17 Hb_004117_070 0.0287570185 - - PREDICTED: GDSL esterase/lipase At1g71691 [Jatropha curcas]
18 Hb_002585_050 0.0373477336 - - conserved hypothetical protein [Ricinus communis]
19 Hb_030385_030 0.0410096954 - - PREDICTED: B3 domain-containing protein At3g19184 isoform X1 [Jatropha curcas]
20 Hb_000227_010 0.041621124 - - hypothetical protein JCGZ_02114 [Jatropha curcas]

Gene co-expression network

sample Hb_000514_010 Hb_000514_010 Hb_001171_020 Hb_001171_020 Hb_000514_010--Hb_001171_020 Hb_001372_010 Hb_001372_010 Hb_000514_010--Hb_001372_010 Hb_004598_010 Hb_004598_010 Hb_000514_010--Hb_004598_010 Hb_182291_010 Hb_182291_010 Hb_000514_010--Hb_182291_010 Hb_004722_050 Hb_004722_050 Hb_000514_010--Hb_004722_050 Hb_002049_040 Hb_002049_040 Hb_000514_010--Hb_002049_040 Hb_001171_020--Hb_001372_010 Hb_001171_020--Hb_004598_010 Hb_001171_020--Hb_182291_010 Hb_001171_020--Hb_002049_040 Hb_006953_010 Hb_006953_010 Hb_001171_020--Hb_006953_010 Hb_001372_010--Hb_004598_010 Hb_001372_010--Hb_182291_010 Hb_001372_010--Hb_002049_040 Hb_001372_010--Hb_006953_010 Hb_107495_020 Hb_107495_020 Hb_001372_010--Hb_107495_020 Hb_004598_010--Hb_182291_010 Hb_004598_010--Hb_002049_040 Hb_004598_010--Hb_006953_010 Hb_004598_010--Hb_107495_020 Hb_182291_010--Hb_002049_040 Hb_182291_010--Hb_006953_010 Hb_182291_010--Hb_107495_020 Hb_001926_050 Hb_001926_050 Hb_004722_050--Hb_001926_050 Hb_004722_050--Hb_001171_020 Hb_004117_070 Hb_004117_070 Hb_004722_050--Hb_004117_070 Hb_004722_050--Hb_001372_010 Hb_004722_050--Hb_004598_010 Hb_002049_040--Hb_006953_010 Hb_002049_040--Hb_107495_020 Hb_001536_070 Hb_001536_070 Hb_002049_040--Hb_001536_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.172335 0.0280816 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis