Hb_000574_040

Information

Type -
Description -
Location Contig574: 54332-55309
Sequence    

Annotation

kegg
ID pop:POPTR_0003s19780g
description POPTRDRAFT_647295; hypothetical protein
nr
ID XP_012073118.1
description PREDICTED: triphosphate tunel metalloenzyme 3-like isoform X1 [Jatropha curcas]
swissprot
ID Q9SIY3
description Triphosphate tunel metalloenzyme 3 OS=Arabidopsis thaliana GN=TTM3 PE=1 SV=1
trembl
ID A0A067KLB2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06097 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000574_040 0.0 - - PREDICTED: triphosphate tunel metalloenzyme 3-like isoform X1 [Jatropha curcas]
2 Hb_004242_120 0.1564255944 - - Organic cation transporter, putative [Ricinus communis]
3 Hb_001377_060 0.1589277707 - - PREDICTED: pentatricopeptide repeat-containing protein At4g01030, mitochondrial [Jatropha curcas]
4 Hb_000966_040 0.1616427423 - - hypothetical protein JCGZ_01642 [Jatropha curcas]
5 Hb_000723_320 0.1622924695 - - PREDICTED: putative cyclic nucleotide-gated ion channel 15 [Jatropha curcas]
6 Hb_000359_160 0.1658653526 - - PREDICTED: protein CAJ1 [Jatropha curcas]
7 Hb_003905_030 0.168629989 - - PREDICTED: clustered mitochondria protein homolog [Jatropha curcas]
8 Hb_003687_160 0.1688176604 - - Ran GTPase binding protein, putative [Ricinus communis]
9 Hb_001584_050 0.1691172038 - - PREDICTED: NHL repeat-containing protein 2 isoform X1 [Jatropha curcas]
10 Hb_000538_300 0.1706660504 - - PREDICTED: WAT1-related protein At3g02690, chloroplastic [Jatropha curcas]
11 Hb_074548_010 0.1706849933 - - PREDICTED: 28 kDa ribonucleoprotein, chloroplastic isoform X1 [Jatropha curcas]
12 Hb_001257_110 0.1715927976 - - PREDICTED: uncharacterized protein LOC105636396 [Jatropha curcas]
13 Hb_000092_060 0.1728110381 - - PREDICTED: uncharacterized protein LOC105646505 [Jatropha curcas]
14 Hb_006277_080 0.1737102959 - - PREDICTED: uncharacterized protein LOC105649701 [Jatropha curcas]
15 Hb_000069_370 0.1742031041 - - -
16 Hb_000208_270 0.1751040331 - - PREDICTED: malate dehydrogenase [NADP], chloroplastic [Jatropha curcas]
17 Hb_002814_010 0.1766930567 - - PREDICTED: adenylate kinase 5, chloroplastic [Jatropha curcas]
18 Hb_000360_010 0.1773758471 - - PREDICTED: ferredoxin-dependent glutamate synthase, chloroplastic isoform X1 [Jatropha curcas]
19 Hb_140389_010 0.1783166342 - - Ran GTPase binding protein, putative [Ricinus communis]
20 Hb_003605_060 0.1789815626 - - PREDICTED: ATP synthase subunit delta, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000574_040 Hb_000574_040 Hb_004242_120 Hb_004242_120 Hb_000574_040--Hb_004242_120 Hb_001377_060 Hb_001377_060 Hb_000574_040--Hb_001377_060 Hb_000966_040 Hb_000966_040 Hb_000574_040--Hb_000966_040 Hb_000723_320 Hb_000723_320 Hb_000574_040--Hb_000723_320 Hb_000359_160 Hb_000359_160 Hb_000574_040--Hb_000359_160 Hb_003905_030 Hb_003905_030 Hb_000574_040--Hb_003905_030 Hb_002030_050 Hb_002030_050 Hb_004242_120--Hb_002030_050 Hb_000173_110 Hb_000173_110 Hb_004242_120--Hb_000173_110 Hb_011472_050 Hb_011472_050 Hb_004242_120--Hb_011472_050 Hb_003687_160 Hb_003687_160 Hb_004242_120--Hb_003687_160 Hb_000574_320 Hb_000574_320 Hb_004242_120--Hb_000574_320 Hb_022693_080 Hb_022693_080 Hb_004242_120--Hb_022693_080 Hb_002835_090 Hb_002835_090 Hb_001377_060--Hb_002835_090 Hb_000254_120 Hb_000254_120 Hb_001377_060--Hb_000254_120 Hb_004712_200 Hb_004712_200 Hb_001377_060--Hb_004712_200 Hb_000193_220 Hb_000193_220 Hb_001377_060--Hb_000193_220 Hb_010721_020 Hb_010721_020 Hb_001377_060--Hb_010721_020 Hb_001584_050 Hb_001584_050 Hb_001377_060--Hb_001584_050 Hb_000975_050 Hb_000975_050 Hb_000966_040--Hb_000975_050 Hb_000966_040--Hb_004712_200 Hb_000966_040--Hb_000193_220 Hb_010098_040 Hb_010098_040 Hb_000966_040--Hb_010098_040 Hb_004109_130 Hb_004109_130 Hb_000966_040--Hb_004109_130 Hb_000208_270 Hb_000208_270 Hb_000966_040--Hb_000208_270 Hb_000723_320--Hb_000359_160 Hb_000723_320--Hb_010721_020 Hb_002475_060 Hb_002475_060 Hb_000723_320--Hb_002475_060 Hb_003605_060 Hb_003605_060 Hb_000723_320--Hb_003605_060 Hb_000723_320--Hb_000208_270 Hb_009393_140 Hb_009393_140 Hb_000723_320--Hb_009393_140 Hb_004979_050 Hb_004979_050 Hb_000359_160--Hb_004979_050 Hb_000679_320 Hb_000679_320 Hb_000359_160--Hb_000679_320 Hb_000359_160--Hb_009393_140 Hb_000359_070 Hb_000359_070 Hb_000359_160--Hb_000359_070 Hb_002814_010 Hb_002814_010 Hb_000359_160--Hb_002814_010 Hb_010080_070 Hb_010080_070 Hb_003905_030--Hb_010080_070 Hb_000360_010 Hb_000360_010 Hb_003905_030--Hb_000360_010 Hb_156850_020 Hb_156850_020 Hb_003905_030--Hb_156850_020 Hb_000103_240 Hb_000103_240 Hb_003905_030--Hb_000103_240 Hb_001257_110 Hb_001257_110 Hb_003905_030--Hb_001257_110 Hb_011900_020 Hb_011900_020 Hb_003905_030--Hb_011900_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.697744 2.55831 4.70045 2.25954 0 0.447854
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.359493 0.904479 0 1.05433 14.9056

CAGE analysis