Hb_000556_190

Information

Type -
Description -
Location Contig556: 186630-194962
Sequence    

Annotation

kegg
ID rcu:RCOM_1612350
description Kinesin-II 85 kDa subunit, putative
nr
ID XP_012083554.1
description PREDICTED: armadillo repeat-containing kinesin-like protein 2 isoform X1 [Jatropha curcas]
swissprot
ID Q9LPC6
description Armadillo repeat-containing kinesin-like protein 2 OS=Arabidopsis thaliana GN=ARK2 PE=1 SV=2
trembl
ID A0A067KAC4
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_14510 PE=3 SV=1
Gene Ontology
ID GO:0005871
description armadillo repeat kinesin 2 isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000556_190 0.0 - - PREDICTED: armadillo repeat-containing kinesin-like protein 2 isoform X1 [Jatropha curcas]
2 Hb_000333_060 0.0820286727 - - PREDICTED: F-box/LRR-repeat protein 4 [Jatropha curcas]
3 Hb_001089_070 0.0949676283 - - PREDICTED: conserved oligomeric Golgi complex subunit 3 [Jatropha curcas]
4 Hb_002073_190 0.1027608716 - - PREDICTED: uncharacterized protein LOC105649812 isoform X1 [Jatropha curcas]
5 Hb_016777_040 0.1046283848 - - PREDICTED: DNA polymerase eta-like [Jatropha curcas]
6 Hb_028308_010 0.1062099723 - - PREDICTED: probable protein S-acyltransferase 4 isoform X1 [Jatropha curcas]
7 Hb_021943_080 0.1065387851 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHH3 isoform X1 [Jatropha curcas]
8 Hb_002110_230 0.1066867168 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
9 Hb_003688_090 0.106988868 - - PREDICTED: ATP synthase subunit gamma, mitochondrial [Jatropha curcas]
10 Hb_001454_370 0.1085129706 - - PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Jatropha curcas]
11 Hb_002272_130 0.108612581 - - PREDICTED: DNA excision repair protein ERCC-1 [Jatropha curcas]
12 Hb_000351_120 0.1086396048 - - hypothetical protein POPTR_0013s10290g [Populus trichocarpa]
13 Hb_133702_030 0.1122670905 - - PREDICTED: uric acid degradation bifunctional protein TTL isoform X1 [Jatropha curcas]
14 Hb_003878_110 0.1129341805 - - PREDICTED: uncharacterized protein LOC105637024 [Jatropha curcas]
15 Hb_005289_040 0.1133160538 - - poly(A) polymerase, putative [Ricinus communis]
16 Hb_002889_010 0.1137554275 - - ubx domain-containing, putative [Ricinus communis]
17 Hb_002398_030 0.1139098532 - - amino acid binding protein, putative [Ricinus communis]
18 Hb_143629_150 0.1140546844 - - PREDICTED: flap endonuclease 1 isoform X2 [Prunus mume]
19 Hb_000134_270 0.1141324141 - - arginine/serine rich splicing factor sf4/14, putative [Ricinus communis]
20 Hb_001935_110 0.1152996567 - - PREDICTED: T-complex protein 1 subunit alpha [Jatropha curcas]

Gene co-expression network

sample Hb_000556_190 Hb_000556_190 Hb_000333_060 Hb_000333_060 Hb_000556_190--Hb_000333_060 Hb_001089_070 Hb_001089_070 Hb_000556_190--Hb_001089_070 Hb_002073_190 Hb_002073_190 Hb_000556_190--Hb_002073_190 Hb_016777_040 Hb_016777_040 Hb_000556_190--Hb_016777_040 Hb_028308_010 Hb_028308_010 Hb_000556_190--Hb_028308_010 Hb_021943_080 Hb_021943_080 Hb_000556_190--Hb_021943_080 Hb_001935_110 Hb_001935_110 Hb_000333_060--Hb_001935_110 Hb_000333_060--Hb_028308_010 Hb_000109_210 Hb_000109_210 Hb_000333_060--Hb_000109_210 Hb_002684_040 Hb_002684_040 Hb_000333_060--Hb_002684_040 Hb_002078_100 Hb_002078_100 Hb_000333_060--Hb_002078_100 Hb_007632_240 Hb_007632_240 Hb_000333_060--Hb_007632_240 Hb_001089_070--Hb_016777_040 Hb_005289_040 Hb_005289_040 Hb_001089_070--Hb_005289_040 Hb_000603_030 Hb_000603_030 Hb_001089_070--Hb_000603_030 Hb_001005_030 Hb_001005_030 Hb_001089_070--Hb_001005_030 Hb_001089_070--Hb_021943_080 Hb_005588_090 Hb_005588_090 Hb_001089_070--Hb_005588_090 Hb_000035_470 Hb_000035_470 Hb_002073_190--Hb_000035_470 Hb_015807_050 Hb_015807_050 Hb_002073_190--Hb_015807_050 Hb_000035_110 Hb_000035_110 Hb_002073_190--Hb_000035_110 Hb_000000_150 Hb_000000_150 Hb_002073_190--Hb_000000_150 Hb_001377_310 Hb_001377_310 Hb_002073_190--Hb_001377_310 Hb_002272_130 Hb_002272_130 Hb_002073_190--Hb_002272_130 Hb_002889_010 Hb_002889_010 Hb_016777_040--Hb_002889_010 Hb_002471_240 Hb_002471_240 Hb_016777_040--Hb_002471_240 Hb_016777_040--Hb_001377_310 Hb_000373_080 Hb_000373_080 Hb_016777_040--Hb_000373_080 Hb_002805_190 Hb_002805_190 Hb_016777_040--Hb_002805_190 Hb_000777_050 Hb_000777_050 Hb_028308_010--Hb_000777_050 Hb_001195_560 Hb_001195_560 Hb_028308_010--Hb_001195_560 Hb_009296_010 Hb_009296_010 Hb_028308_010--Hb_009296_010 Hb_002398_030 Hb_002398_030 Hb_028308_010--Hb_002398_030 Hb_001619_150 Hb_001619_150 Hb_028308_010--Hb_001619_150 Hb_001158_160 Hb_001158_160 Hb_021943_080--Hb_001158_160 Hb_000120_210 Hb_000120_210 Hb_021943_080--Hb_000120_210 Hb_021943_080--Hb_016777_040 Hb_004096_240 Hb_004096_240 Hb_021943_080--Hb_004096_240 Hb_077026_010 Hb_077026_010 Hb_021943_080--Hb_077026_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.23428 2.21118 5.49158 3.77229 4.93452 5.11603
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.36617 1.68698 1.68703 4.86965 3.39645

CAGE analysis