Hb_000422_130

Information

Type -
Description -
Location Contig422: 198939-204496
Sequence    

Annotation

kegg
ID rcu:RCOM_1282950
description ATP binding protein, putative (EC:2.7.11.1)
nr
ID KDP31661.1
description hypothetical protein JCGZ_15217 [Jatropha curcas]
swissprot
ID Q0WPH8
description Serine/threonine-protein kinase Nek5 OS=Arabidopsis thaliana GN=NEK5 PE=1 SV=1
trembl
ID A0A067K606
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15217 PE=4 SV=1
Gene Ontology
ID GO:0016772
description serine threonine-protein kinase nek5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000422_130 0.0 - - hypothetical protein JCGZ_15217 [Jatropha curcas]
2 Hb_000818_100 0.1715443743 - - PREDICTED: delta(24)-sterol reductase [Jatropha curcas]
3 Hb_003029_060 0.1755671401 - - PREDICTED: proline-rich receptor-like protein kinase PERK3 isoform X1 [Jatropha curcas]
4 Hb_003605_040 0.1792194169 - - PREDICTED: somatic embryogenesis receptor kinase 2 isoform X1 [Jatropha curcas]
5 Hb_187021_010 0.1850387905 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
6 Hb_003929_190 0.1878134491 - - PREDICTED: probable receptor-like protein kinase At5g18500 [Jatropha curcas]
7 Hb_001595_040 0.1949095642 - - Root phototropism protein, putative [Ricinus communis]
8 Hb_000889_100 0.2032731181 - - PREDICTED: syntaxin-132-like isoform X2 [Sesamum indicum]
9 Hb_054541_010 0.2059469723 - - PREDICTED: choline monooxygenase, chloroplastic isoform X3 [Jatropha curcas]
10 Hb_083493_010 0.2075126015 - - Disease resistance protein RPS5, putative [Ricinus communis]
11 Hb_164010_050 0.2084984867 - - PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH1 [Jatropha curcas]
12 Hb_001474_040 0.2102730023 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 [Jatropha curcas]
13 Hb_051257_010 0.2148114013 - - -
14 Hb_008119_030 0.2155439966 - - PREDICTED: peroxidase 63-like [Jatropha curcas]
15 Hb_005941_030 0.2158076277 transcription factor TF Family: HB DNA binding protein, putative [Ricinus communis]
16 Hb_017014_010 0.2166062687 - - PREDICTED: syntaxin-132-like isoform X1 [Jatropha curcas]
17 Hb_029695_050 0.2205655983 - - PREDICTED: fasciclin-like arabinogalactan protein 1 [Jatropha curcas]
18 Hb_000242_030 0.2238024355 - - PREDICTED: uncharacterized protein LOC102608003 [Citrus sinensis]
19 Hb_000184_160 0.2238437715 - - PREDICTED: uncharacterized protein LOC105647991 [Jatropha curcas]
20 Hb_001935_090 0.2245006474 - - PREDICTED: uncharacterized protein LOC105643180 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000422_130 Hb_000422_130 Hb_000818_100 Hb_000818_100 Hb_000422_130--Hb_000818_100 Hb_003029_060 Hb_003029_060 Hb_000422_130--Hb_003029_060 Hb_003605_040 Hb_003605_040 Hb_000422_130--Hb_003605_040 Hb_187021_010 Hb_187021_010 Hb_000422_130--Hb_187021_010 Hb_003929_190 Hb_003929_190 Hb_000422_130--Hb_003929_190 Hb_001595_040 Hb_001595_040 Hb_000422_130--Hb_001595_040 Hb_029695_050 Hb_029695_050 Hb_000818_100--Hb_029695_050 Hb_009247_010 Hb_009247_010 Hb_000818_100--Hb_009247_010 Hb_009222_070 Hb_009222_070 Hb_000818_100--Hb_009222_070 Hb_000503_020 Hb_000503_020 Hb_000818_100--Hb_000503_020 Hb_000098_050 Hb_000098_050 Hb_000818_100--Hb_000098_050 Hb_000134_120 Hb_000134_120 Hb_000818_100--Hb_000134_120 Hb_003029_060--Hb_003929_190 Hb_005941_030 Hb_005941_030 Hb_003029_060--Hb_005941_030 Hb_009838_020 Hb_009838_020 Hb_003029_060--Hb_009838_020 Hb_014497_040 Hb_014497_040 Hb_003029_060--Hb_014497_040 Hb_000071_160 Hb_000071_160 Hb_003029_060--Hb_000071_160 Hb_000977_290 Hb_000977_290 Hb_003029_060--Hb_000977_290 Hb_008119_030 Hb_008119_030 Hb_003605_040--Hb_008119_030 Hb_164010_050 Hb_164010_050 Hb_003605_040--Hb_164010_050 Hb_003605_040--Hb_009222_070 Hb_002498_240 Hb_002498_240 Hb_003605_040--Hb_002498_240 Hb_009808_010 Hb_009808_010 Hb_003605_040--Hb_009808_010 Hb_003605_040--Hb_000818_100 Hb_083493_010 Hb_083493_010 Hb_187021_010--Hb_083493_010 Hb_035761_010 Hb_035761_010 Hb_187021_010--Hb_035761_010 Hb_001688_070 Hb_001688_070 Hb_187021_010--Hb_001688_070 Hb_000099_190 Hb_000099_190 Hb_187021_010--Hb_000099_190 Hb_005016_020 Hb_005016_020 Hb_187021_010--Hb_005016_020 Hb_000012_400 Hb_000012_400 Hb_003929_190--Hb_000012_400 Hb_002539_050 Hb_002539_050 Hb_003929_190--Hb_002539_050 Hb_003929_190--Hb_005941_030 Hb_003929_190--Hb_000071_160 Hb_000203_070 Hb_000203_070 Hb_003929_190--Hb_000203_070 Hb_001935_090 Hb_001935_090 Hb_001595_040--Hb_001935_090 Hb_001595_040--Hb_003029_060 Hb_003102_030 Hb_003102_030 Hb_001595_040--Hb_003102_030 Hb_000011_070 Hb_000011_070 Hb_001595_040--Hb_000011_070 Hb_000963_050 Hb_000963_050 Hb_001595_040--Hb_000963_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.519213 0.325515 0.818317 1.66461 0.10123 0.558443
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0180782 0.171335 0.345284 0.343687

CAGE analysis