Hb_000359_130

Information

Type -
Description -
Location Contig359: 156162-158645
Sequence    

Annotation

kegg
ID rcu:RCOM_1192240
description 4-hydroxyphenylpyruvate dioxygenase, putative (EC:1.13.11.27)
nr
ID BAH10638.1
description 4-hydroxyphenylpyruvate dioxygenase [Hevea brasiliensis]
swissprot
ID P93836
description 4-hydroxyphenylpyruvate dioxygenase OS=Arabidopsis thaliana GN=HPD PE=1 SV=2
trembl
ID B7X935
description 4-hydroxyphenylpyruvate dioxygenase OS=Hevea brasiliensis GN=hppd PE=2 SV=1
Gene Ontology
ID GO:0003868
description 4-hydroxyphenylpyruvate dioxygenase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37047: 156160-158612
cDNA
(Sanger)
(ID:Location)		 004_B19.ab1: 156160-156945

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000359_130 0.0 - - 4-hydroxyphenylpyruvate dioxygenase [Hevea brasiliensis]
2 Hb_001635_210 0.0779383559 - - PREDICTED: protein EARLY FLOWERING 3 isoform X1 [Jatropha curcas]
3 Hb_002411_190 0.0983180742 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
4 Hb_000868_120 0.0994680404 - - PREDICTED: suppressor of mec-8 and unc-52 protein homolog 2 [Jatropha curcas]
5 Hb_005288_070 0.1012684706 transcription factor TF Family: G2-like DNA binding protein, putative [Ricinus communis]
6 Hb_002126_030 0.1015110032 - - ferrochelatase, putative [Ricinus communis]
7 Hb_002928_140 0.1034882113 - - PREDICTED: BTB/POZ domain-containing protein At2g30600 isoform X1 [Jatropha curcas]
8 Hb_004619_060 0.103807053 - - PREDICTED: uncharacterized protein At1g10890-like [Nelumbo nucifera]
9 Hb_001999_140 0.1044433132 - - PREDICTED: anthranilate synthase alpha subunit 2, chloroplastic isoform X2 [Jatropha curcas]
10 Hb_001439_220 0.1046467484 - - xenotropic and polytropic murine leukemia virus receptor ids-4, putative [Ricinus communis]
11 Hb_033642_120 0.1060829694 - - PREDICTED: nucleolar GTP-binding protein 2 [Vitis vinifera]
12 Hb_008054_040 0.1061818241 - - PREDICTED: cullin-4 [Jatropha curcas]
13 Hb_003093_040 0.1070980429 - - PREDICTED: nucleolar complex protein 4 homolog isoform X1 [Jatropha curcas]
14 Hb_000030_140 0.1073847191 - - PREDICTED: general negative regulator of transcription subunit 3 isoform X1 [Jatropha curcas]
15 Hb_002968_070 0.1089571099 - - PREDICTED: transcription initiation factor TFIID subunit 4b isoform X2 [Jatropha curcas]
16 Hb_003470_040 0.109651973 - - PREDICTED: 2-oxoisovalerate dehydrogenase subunit beta 1, mitochondrial [Jatropha curcas]
17 Hb_002581_010 0.1103849181 - - PREDICTED: uncharacterized protein LOC105641469 isoform X2 [Jatropha curcas]
18 Hb_009158_060 0.111604564 - - PREDICTED: CDPK-related kinase 3 [Jatropha curcas]
19 Hb_172979_010 0.1116352717 - - PREDICTED: protein disulfide-isomerase SCO2 [Jatropha curcas]
20 Hb_000500_300 0.1156550289 - - PREDICTED: nucleolar protein 10 [Jatropha curcas]

Gene co-expression network

sample Hb_000359_130 Hb_000359_130 Hb_001635_210 Hb_001635_210 Hb_000359_130--Hb_001635_210 Hb_002411_190 Hb_002411_190 Hb_000359_130--Hb_002411_190 Hb_000868_120 Hb_000868_120 Hb_000359_130--Hb_000868_120 Hb_005288_070 Hb_005288_070 Hb_000359_130--Hb_005288_070 Hb_002126_030 Hb_002126_030 Hb_000359_130--Hb_002126_030 Hb_002928_140 Hb_002928_140 Hb_000359_130--Hb_002928_140 Hb_001635_210--Hb_002411_190 Hb_000445_060 Hb_000445_060 Hb_001635_210--Hb_000445_060 Hb_008642_060 Hb_008642_060 Hb_001635_210--Hb_008642_060 Hb_001635_210--Hb_000868_120 Hb_001635_210--Hb_005288_070 Hb_007012_030 Hb_007012_030 Hb_002411_190--Hb_007012_030 Hb_002600_070 Hb_002600_070 Hb_002411_190--Hb_002600_070 Hb_009158_060 Hb_009158_060 Hb_002411_190--Hb_009158_060 Hb_168893_030 Hb_168893_030 Hb_002411_190--Hb_168893_030 Hb_000748_090 Hb_000748_090 Hb_002411_190--Hb_000748_090 Hb_000868_120--Hb_000445_060 Hb_010287_020 Hb_010287_020 Hb_000868_120--Hb_010287_020 Hb_033642_120 Hb_033642_120 Hb_000868_120--Hb_033642_120 Hb_000676_330 Hb_000676_330 Hb_000868_120--Hb_000676_330 Hb_001439_220 Hb_001439_220 Hb_000868_120--Hb_001439_220 Hb_000661_120 Hb_000661_120 Hb_000868_120--Hb_000661_120 Hb_007283_010 Hb_007283_010 Hb_005288_070--Hb_007283_010 Hb_030414_040 Hb_030414_040 Hb_005288_070--Hb_030414_040 Hb_007044_110 Hb_007044_110 Hb_005288_070--Hb_007044_110 Hb_000205_260 Hb_000205_260 Hb_005288_070--Hb_000205_260 Hb_000457_230 Hb_000457_230 Hb_005288_070--Hb_000457_230 Hb_000111_170 Hb_000111_170 Hb_005288_070--Hb_000111_170 Hb_000699_150 Hb_000699_150 Hb_002126_030--Hb_000699_150 Hb_004333_040 Hb_004333_040 Hb_002126_030--Hb_004333_040 Hb_011674_040 Hb_011674_040 Hb_002126_030--Hb_011674_040 Hb_000072_170 Hb_000072_170 Hb_002126_030--Hb_000072_170 Hb_007413_010 Hb_007413_010 Hb_002126_030--Hb_007413_010 Hb_113853_010 Hb_113853_010 Hb_002126_030--Hb_113853_010 Hb_013607_050 Hb_013607_050 Hb_002928_140--Hb_013607_050 Hb_002928_140--Hb_001635_210 Hb_002928_140--Hb_000868_120 Hb_002928_140--Hb_002126_030 Hb_002203_030 Hb_002203_030 Hb_002928_140--Hb_002203_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
36.606 67.3906 86.2341 27.4589 28.1065 23.832
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
35.1924 26.6675 18.1072 56.5493 71.2651

CAGE analysis