Hb_000343_020

Information

Type -
Description -
Location Contig343: 10060-13249
Sequence    

Annotation

kegg
ID rcu:RCOM_1494500
description Peroxidase 57 precursor, putative (EC:1.11.1.7)
nr
ID XP_012073461.1
description PREDICTED: putative Peroxidase 48 [Jatropha curcas]
swissprot
ID O81755
description Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=3 SV=3
trembl
ID B9RQN7
description Peroxidase OS=Ricinus communis GN=RCOM_1494500 PE=3 SV=1
Gene Ontology
ID GO:0004601
description peroxidase 48

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_35818: 12244-13269 , PASA_asmbl_35819: 12313-13269
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000343_020 0.0 - - PREDICTED: putative Peroxidase 48 [Jatropha curcas]
2 Hb_002874_120 0.108308628 - - PREDICTED: calmodulin-like protein 7 [Jatropha curcas]
3 Hb_009339_040 0.1128789029 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002081_060 0.1187164791 - - cyclin d, putative [Ricinus communis]
5 Hb_004607_020 0.1196952542 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Jatropha curcas]
6 Hb_011849_030 0.1308377468 - - conserved hypothetical protein [Ricinus communis]
7 Hb_033152_060 0.1313344838 - - PREDICTED: phragmoplast orienting kinesin 2 [Jatropha curcas]
8 Hb_005568_140 0.131747962 - - ATP binding protein, putative [Ricinus communis]
9 Hb_033041_010 0.1329414496 - - PREDICTED: phragmoplast orienting kinesin 2-like [Populus euphratica]
10 Hb_027337_010 0.1334485139 - - Potassium transporter, putative [Ricinus communis]
11 Hb_002918_220 0.1340105796 - - PREDICTED: uncharacterized protein LOC105138896 [Populus euphratica]
12 Hb_001649_050 0.1363170974 - - Shaggy-like kinase 13 isoform 1 [Theobroma cacao]
13 Hb_002871_130 0.1392971503 - - PREDICTED: non-structural maintenance of chromosomes element 4 homolog A isoform X2 [Jatropha curcas]
14 Hb_001761_010 0.1407045871 - - PREDICTED: uncharacterized protein LOC105639282 [Jatropha curcas]
15 Hb_001934_040 0.1425283727 - - PREDICTED: vacuolar iron transporter 1-like [Jatropha curcas]
16 Hb_005542_150 0.1427672877 - - PREDICTED: uncharacterized protein LOC105649178 [Jatropha curcas]
17 Hb_001571_080 0.1430600942 - - PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Jatropha curcas]
18 Hb_007632_080 0.144391412 - - PREDICTED: intracellular protein transport protein USO1 [Jatropha curcas]
19 Hb_003109_010 0.1496701529 - - PREDICTED: kinesin-like protein KIN12B [Jatropha curcas]
20 Hb_000189_350 0.1499262966 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 3 [Jatropha curcas]

Gene co-expression network

sample Hb_000343_020 Hb_000343_020 Hb_002874_120 Hb_002874_120 Hb_000343_020--Hb_002874_120 Hb_009339_040 Hb_009339_040 Hb_000343_020--Hb_009339_040 Hb_002081_060 Hb_002081_060 Hb_000343_020--Hb_002081_060 Hb_004607_020 Hb_004607_020 Hb_000343_020--Hb_004607_020 Hb_011849_030 Hb_011849_030 Hb_000343_020--Hb_011849_030 Hb_033152_060 Hb_033152_060 Hb_000343_020--Hb_033152_060 Hb_002874_120--Hb_011849_030 Hb_002918_220 Hb_002918_220 Hb_002874_120--Hb_002918_220 Hb_005568_140 Hb_005568_140 Hb_002874_120--Hb_005568_140 Hb_027337_010 Hb_027337_010 Hb_002874_120--Hb_027337_010 Hb_000200_270 Hb_000200_270 Hb_002874_120--Hb_000200_270 Hb_009339_040--Hb_011849_030 Hb_004007_130 Hb_004007_130 Hb_009339_040--Hb_004007_130 Hb_002311_090 Hb_002311_090 Hb_009339_040--Hb_002311_090 Hb_009339_040--Hb_027337_010 Hb_024682_030 Hb_024682_030 Hb_009339_040--Hb_024682_030 Hb_000205_180 Hb_000205_180 Hb_002081_060--Hb_000205_180 Hb_001310_060 Hb_001310_060 Hb_002081_060--Hb_001310_060 Hb_001999_160 Hb_001999_160 Hb_002081_060--Hb_001999_160 Hb_001369_550 Hb_001369_550 Hb_002081_060--Hb_001369_550 Hb_002081_060--Hb_004607_020 Hb_003626_020 Hb_003626_020 Hb_002081_060--Hb_003626_020 Hb_001284_070 Hb_001284_070 Hb_004607_020--Hb_001284_070 Hb_004607_020--Hb_001310_060 Hb_080147_070 Hb_080147_070 Hb_004607_020--Hb_080147_070 Hb_004607_020--Hb_003626_020 Hb_002700_030 Hb_002700_030 Hb_004607_020--Hb_002700_030 Hb_004607_020--Hb_001369_550 Hb_001159_220 Hb_001159_220 Hb_011849_030--Hb_001159_220 Hb_001649_050 Hb_001649_050 Hb_011849_030--Hb_001649_050 Hb_005306_030 Hb_005306_030 Hb_011849_030--Hb_005306_030 Hb_011849_030--Hb_004607_020 Hb_011849_030--Hb_027337_010 Hb_002995_010 Hb_002995_010 Hb_011849_030--Hb_002995_010 Hb_000189_350 Hb_000189_350 Hb_033152_060--Hb_000189_350 Hb_001864_040 Hb_001864_040 Hb_033152_060--Hb_001864_040 Hb_000316_070 Hb_000316_070 Hb_033152_060--Hb_000316_070 Hb_002205_180 Hb_002205_180 Hb_033152_060--Hb_002205_180 Hb_027905_040 Hb_027905_040 Hb_033152_060--Hb_027905_040 Hb_004635_020 Hb_004635_020 Hb_033152_060--Hb_004635_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.603487 1.5229 14.0975 5.79043 0.141063 0.0142487
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.111079 0.029127 0 2.42364 1.81581

CAGE analysis