Hb_000300_520

Information

Type -
Description -
Location Contig300: 499363-502843
Sequence    

Annotation

kegg
ID rcu:RCOM_1322270
description hydrolase, hydrolyzing O-glycosyl compounds, putative (EC:3.2.1.21)
nr
ID KDP39682.1
description hypothetical protein JCGZ_02702 [Jatropha curcas]
swissprot
ID A7LXU3
description Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC 11153) GN=BACOVA_02659 PE=1 SV=1
trembl
ID A0A067KU67
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02702 PE=4 SV=1
Gene Ontology
ID GO:0008422
description lysosomal beta glucosidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000300_520 0.0 - - hypothetical protein JCGZ_02702 [Jatropha curcas]
2 Hb_069355_010 0.151552172 - - NBS-LRR resistance protein RGH2 [Manihot esculenta]
3 Hb_002129_020 0.1563211381 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX14 [Jatropha curcas]
4 Hb_001195_090 0.1681731397 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
5 Hb_001999_100 0.1708776035 - - PREDICTED: UDP-glycosyltransferase 71D1-like [Jatropha curcas]
6 Hb_001216_110 0.1734337636 - - PREDICTED: protein GPR107-like [Jatropha curcas]
7 Hb_032143_020 0.1744961115 - - hypothetical protein POPTR_0009s06310g [Populus trichocarpa]
8 Hb_000226_070 0.1756975295 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump [Jatropha curcas]
9 Hb_028639_030 0.1921751579 - - PREDICTED: transmembrane 9 superfamily member 2-like [Jatropha curcas]
10 Hb_026527_010 0.1927514419 - - PREDICTED: caffeoylshikimate esterase-like [Populus euphratica]
11 Hb_003071_070 0.192969564 - - sucrose synthase 3 [Hevea brasiliensis]
12 Hb_000236_190 0.1933814838 - - PREDICTED: adenosylhomocysteinase 1 [Jatropha curcas]
13 Hb_002660_110 0.1935444733 - - PREDICTED: serine/threonine-protein kinase-like protein CCR1 isoform X1 [Jatropha curcas]
14 Hb_009674_010 0.1947049554 - - AAEL007687-PA [Aedes aegypti]
15 Hb_003052_030 0.1967836185 - - 6-phosphogluconate dehydrogenase family protein isoform 1 [Theobroma cacao]
16 Hb_000679_040 0.1971236948 - - Cellulose synthase 1 [Theobroma cacao]
17 Hb_007574_070 0.1972040422 - - fatty acid desaturase, putative [Ricinus communis]
18 Hb_000138_060 0.1985365611 - - PREDICTED: protein trichome birefringence [Jatropha curcas]
19 Hb_020586_010 0.1995073213 - - Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis]
20 Hb_002157_270 0.1996219947 - - PREDICTED: transmembrane protein 87B [Jatropha curcas]

Gene co-expression network

sample Hb_000300_520 Hb_000300_520 Hb_069355_010 Hb_069355_010 Hb_000300_520--Hb_069355_010 Hb_002129_020 Hb_002129_020 Hb_000300_520--Hb_002129_020 Hb_001195_090 Hb_001195_090 Hb_000300_520--Hb_001195_090 Hb_001999_100 Hb_001999_100 Hb_000300_520--Hb_001999_100 Hb_001216_110 Hb_001216_110 Hb_000300_520--Hb_001216_110 Hb_032143_020 Hb_032143_020 Hb_000300_520--Hb_032143_020 Hb_020805_140 Hb_020805_140 Hb_069355_010--Hb_020805_140 Hb_000210_100 Hb_000210_100 Hb_069355_010--Hb_000210_100 Hb_001481_130 Hb_001481_130 Hb_069355_010--Hb_001481_130 Hb_001289_020 Hb_001289_020 Hb_069355_010--Hb_001289_020 Hb_026527_010 Hb_026527_010 Hb_069355_010--Hb_026527_010 Hb_002129_020--Hb_001195_090 Hb_002129_020--Hb_001216_110 Hb_020586_010 Hb_020586_010 Hb_002129_020--Hb_020586_010 Hb_009674_010 Hb_009674_010 Hb_002129_020--Hb_009674_010 Hb_028639_030 Hb_028639_030 Hb_002129_020--Hb_028639_030 Hb_002157_270 Hb_002157_270 Hb_002129_020--Hb_002157_270 Hb_001195_090--Hb_028639_030 Hb_001195_090--Hb_001216_110 Hb_002596_080 Hb_002596_080 Hb_001195_090--Hb_002596_080 Hb_000684_310 Hb_000684_310 Hb_001195_090--Hb_000684_310 Hb_001493_060 Hb_001493_060 Hb_001195_090--Hb_001493_060 Hb_001481_150 Hb_001481_150 Hb_001999_100--Hb_001481_150 Hb_006569_060 Hb_006569_060 Hb_001999_100--Hb_006569_060 Hb_002660_110 Hb_002660_110 Hb_001999_100--Hb_002660_110 Hb_033152_070 Hb_033152_070 Hb_001999_100--Hb_033152_070 Hb_000008_190 Hb_000008_190 Hb_001999_100--Hb_000008_190 Hb_026740_020 Hb_026740_020 Hb_001999_100--Hb_026740_020 Hb_000679_040 Hb_000679_040 Hb_001216_110--Hb_000679_040 Hb_001216_110--Hb_028639_030 Hb_021576_070 Hb_021576_070 Hb_001216_110--Hb_021576_070 Hb_001969_140 Hb_001969_140 Hb_001216_110--Hb_001969_140 Hb_001195_310 Hb_001195_310 Hb_001216_110--Hb_001195_310 Hb_000671_130 Hb_000671_130 Hb_032143_020--Hb_000671_130 Hb_003207_150 Hb_003207_150 Hb_032143_020--Hb_003207_150 Hb_001369_630 Hb_001369_630 Hb_032143_020--Hb_001369_630 Hb_007632_100 Hb_007632_100 Hb_032143_020--Hb_007632_100 Hb_122636_010 Hb_122636_010 Hb_032143_020--Hb_122636_010 Hb_000696_070 Hb_000696_070 Hb_032143_020--Hb_000696_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.156248 0.0776065 0.103654 0.783774 0.0948418 0.0282054
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0889901 0.0175051 0.132827 0.139269 0.25906

CAGE analysis