Hb_000203_220

Information

Type -
Description -
Location Contig203: 268401-268811
Sequence    

Annotation

kegg
ID sot:102602677
description uncharacterized LOC102602677
nr
ID XP_011087012.1
description PREDICTED: uncharacterized protein LOC105168575 [Sesamum indicum]
swissprot
ID -
description -
trembl
ID A0A0D2SYB6
description Gossypium raimondii chromosome 10, whole genome shotgun sequence OS=Gossypium raimondii GN=B456_010G242000 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000203_220 0.0 - - PREDICTED: uncharacterized protein LOC105168575 [Sesamum indicum]
2 Hb_004607_040 0.1984002476 - - ADP,ATP carrier protein, putative [Ricinus communis]
3 Hb_012633_030 0.2289937539 - - hypothetical protein RCOM_0452240 [Ricinus communis]
4 Hb_003470_060 0.2347271682 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 45 [Jatropha curcas]
5 Hb_001558_030 0.253466602 - - phosphofructokinase [Hevea brasiliensis]
6 Hb_004346_010 0.2578200149 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002311_270 0.2830592378 - - PREDICTED: WD repeat-containing protein 43-like [Malus domestica]
8 Hb_008226_020 0.2878296478 - - hypothetical protein JCGZ_03321 [Jatropha curcas]
9 Hb_000116_120 0.2903110301 - - PREDICTED: disease resistance response protein 206-like [Jatropha curcas]
10 Hb_001916_030 0.2930433952 - - PREDICTED: uncharacterized protein LOC105802975 [Gossypium raimondii]
11 Hb_009467_040 0.3001536248 - - PREDICTED: putative B3 domain-containing protein At3g24850 [Jatropha curcas]
12 Hb_001474_010 0.30316801 - - PREDICTED: synaptotagmin-3 isoform X1 [Jatropha curcas]
13 Hb_000046_610 0.305619921 - - PREDICTED: putative cullin-like protein 2 isoform X3 [Populus euphratica]
14 Hb_178703_010 0.3173103905 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
15 Hb_032223_020 0.3180711252 - - ATP binding protein, putative [Ricinus communis]
16 Hb_182680_010 0.3183610128 - - hypothetical protein JCGZ_07831 [Jatropha curcas]
17 Hb_007885_020 0.3194900858 - - hypothetical protein JCGZ_04862 [Jatropha curcas]
18 Hb_001652_070 0.3220131026 - - PREDICTED: uncharacterized protein LOC103439285 [Malus domestica]
19 Hb_000260_740 0.3221617156 - - -
20 Hb_078081_020 0.3229447925 - - -

Gene co-expression network

sample Hb_000203_220 Hb_000203_220 Hb_004607_040 Hb_004607_040 Hb_000203_220--Hb_004607_040 Hb_012633_030 Hb_012633_030 Hb_000203_220--Hb_012633_030 Hb_003470_060 Hb_003470_060 Hb_000203_220--Hb_003470_060 Hb_001558_030 Hb_001558_030 Hb_000203_220--Hb_001558_030 Hb_004346_010 Hb_004346_010 Hb_000203_220--Hb_004346_010 Hb_002311_270 Hb_002311_270 Hb_000203_220--Hb_002311_270 Hb_004607_040--Hb_012633_030 Hb_004607_040--Hb_001558_030 Hb_078081_010 Hb_078081_010 Hb_004607_040--Hb_078081_010 Hb_000046_610 Hb_000046_610 Hb_004607_040--Hb_000046_610 Hb_004607_040--Hb_004346_010 Hb_000058_090 Hb_000058_090 Hb_012633_030--Hb_000058_090 Hb_012633_030--Hb_002311_270 Hb_012633_030--Hb_078081_010 Hb_000189_590 Hb_000189_590 Hb_012633_030--Hb_000189_590 Hb_012633_030--Hb_004346_010 Hb_000189_220 Hb_000189_220 Hb_003470_060--Hb_000189_220 Hb_078081_020 Hb_078081_020 Hb_003470_060--Hb_078081_020 Hb_008226_020 Hb_008226_020 Hb_003470_060--Hb_008226_020 Hb_000751_050 Hb_000751_050 Hb_003470_060--Hb_000751_050 Hb_146930_010 Hb_146930_010 Hb_003470_060--Hb_146930_010 Hb_001558_030--Hb_000046_610 Hb_002539_010 Hb_002539_010 Hb_001558_030--Hb_002539_010 Hb_009467_040 Hb_009467_040 Hb_001558_030--Hb_009467_040 Hb_000116_590 Hb_000116_590 Hb_001558_030--Hb_000116_590 Hb_000116_120 Hb_000116_120 Hb_001558_030--Hb_000116_120 Hb_000186_290 Hb_000186_290 Hb_004346_010--Hb_000186_290 Hb_001916_030 Hb_001916_030 Hb_004346_010--Hb_001916_030 Hb_004545_070 Hb_004545_070 Hb_004346_010--Hb_004545_070 Hb_007885_020 Hb_007885_020 Hb_004346_010--Hb_007885_020 Hb_009545_030 Hb_009545_030 Hb_004346_010--Hb_009545_030 Hb_004346_010--Hb_078081_010 Hb_002456_020 Hb_002456_020 Hb_002311_270--Hb_002456_020 Hb_000117_150 Hb_000117_150 Hb_002311_270--Hb_000117_150 Hb_005288_060 Hb_005288_060 Hb_002311_270--Hb_005288_060 Hb_001971_050 Hb_001971_050 Hb_002311_270--Hb_001971_050 Hb_002874_030 Hb_002874_030 Hb_002311_270--Hb_002874_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.130011 0.280743 0 0.145386
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.189267 0 0 0.823931 0.263634

CAGE analysis