Hb_000098_090

Information

Type -
Description -
Location Contig98: 104351-105167
Sequence    

Annotation

kegg
ID rcu:RCOM_1508860
description ATP binding protein, putative
nr
ID XP_012079985.1
description PREDICTED: uncharacterized protein LOC105640313 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KGR5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11410 PE=4 SV=1
Gene Ontology
ID GO:0005515
description octicosapeptide phox bem1p family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000098_090 0.0 - - PREDICTED: uncharacterized protein LOC105640313 [Jatropha curcas]
2 Hb_001417_020 0.2830547815 - - PREDICTED: uncharacterized protein LOC104799692 [Tarenaya hassleriana]
3 Hb_033279_010 0.295291277 - - DNA/RNA polymerases superfamily protein, putative [Theobroma cacao]
4 Hb_007148_010 0.3026796338 - - PREDICTED: uncharacterized protein LOC103427080 [Malus domestica]
5 Hb_000089_050 0.3056209082 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
6 Hb_000463_030 0.3171220112 - - -
7 Hb_075722_010 0.3396462906 - - hypothetical protein JCGZ_01984 [Jatropha curcas]
8 Hb_002520_010 0.3467278974 - - PREDICTED: uncharacterized protein LOC105775392, partial [Gossypium raimondii]
9 Hb_067730_010 0.3468219922 - - hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
10 Hb_004619_070 0.3607415866 - - hypothetical protein POPTR_0006s00550g [Populus trichocarpa]
11 Hb_000085_030 0.3652557123 - - -
12 Hb_087426_010 0.3657154327 - - PREDICTED: uncharacterized protein LOC105803348 [Gossypium raimondii]
13 Hb_155720_010 0.3659936277 - - PREDICTED: uncharacterized protein LOC104115978 [Nicotiana tomentosiformis]
14 Hb_003725_050 0.3663129441 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
15 Hb_011872_010 0.3675108385 - - -
16 Hb_000140_430 0.3682373543 - - -
17 Hb_080952_050 0.3683344752 - - PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial [Nelumbo nucifera]
18 Hb_000237_210 0.3692681712 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002652_010 0.3704205936 - - -
20 Hb_056550_010 0.3712732572 - - PREDICTED: uncharacterized protein LOC104112577 [Nicotiana tomentosiformis]

Gene co-expression network

sample Hb_000098_090 Hb_000098_090 Hb_001417_020 Hb_001417_020 Hb_000098_090--Hb_001417_020 Hb_033279_010 Hb_033279_010 Hb_000098_090--Hb_033279_010 Hb_007148_010 Hb_007148_010 Hb_000098_090--Hb_007148_010 Hb_000089_050 Hb_000089_050 Hb_000098_090--Hb_000089_050 Hb_000463_030 Hb_000463_030 Hb_000098_090--Hb_000463_030 Hb_075722_010 Hb_075722_010 Hb_000098_090--Hb_075722_010 Hb_008123_010 Hb_008123_010 Hb_001417_020--Hb_008123_010 Hb_154141_010 Hb_154141_010 Hb_001417_020--Hb_154141_010 Hb_000599_230 Hb_000599_230 Hb_001417_020--Hb_000599_230 Hb_090530_010 Hb_090530_010 Hb_001417_020--Hb_090530_010 Hb_031658_040 Hb_031658_040 Hb_001417_020--Hb_031658_040 Hb_012165_020 Hb_012165_020 Hb_001417_020--Hb_012165_020 Hb_033279_010--Hb_007148_010 Hb_012305_080 Hb_012305_080 Hb_033279_010--Hb_012305_080 Hb_009986_010 Hb_009986_010 Hb_033279_010--Hb_009986_010 Hb_005714_030 Hb_005714_030 Hb_033279_010--Hb_005714_030 Hb_008305_010 Hb_008305_010 Hb_033279_010--Hb_008305_010 Hb_003725_050 Hb_003725_050 Hb_007148_010--Hb_003725_050 Hb_002520_010 Hb_002520_010 Hb_007148_010--Hb_002520_010 Hb_126044_010 Hb_126044_010 Hb_007148_010--Hb_126044_010 Hb_015778_020 Hb_015778_020 Hb_007148_010--Hb_015778_020 Hb_015076_020 Hb_015076_020 Hb_000089_050--Hb_015076_020 Hb_105581_010 Hb_105581_010 Hb_000089_050--Hb_105581_010 Hb_008783_010 Hb_008783_010 Hb_000089_050--Hb_008783_010 Hb_009152_030 Hb_009152_030 Hb_000089_050--Hb_009152_030 Hb_031866_030 Hb_031866_030 Hb_000089_050--Hb_031866_030 Hb_002060_040 Hb_002060_040 Hb_000089_050--Hb_002060_040 Hb_000463_030--Hb_105581_010 Hb_001488_260 Hb_001488_260 Hb_000463_030--Hb_001488_260 Hb_000463_030--Hb_001417_020 Hb_000463_030--Hb_008123_010 Hb_000463_030--Hb_154141_010 Hb_004687_010 Hb_004687_010 Hb_000463_030--Hb_004687_010 Hb_000351_150 Hb_000351_150 Hb_075722_010--Hb_000351_150 Hb_056550_010 Hb_056550_010 Hb_075722_010--Hb_056550_010 Hb_038508_010 Hb_038508_010 Hb_075722_010--Hb_038508_010 Hb_000155_240 Hb_000155_240 Hb_075722_010--Hb_000155_240 Hb_087426_010 Hb_087426_010 Hb_075722_010--Hb_087426_010 Hb_000789_140 Hb_000789_140 Hb_075722_010--Hb_000789_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.268492 0.0871284 0 0.0305876 0 0.136643
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0796383 0 0 0.050922 0.371991

CAGE analysis