Hb_000082_070

Information

Type -
Description -
Location Contig82: 319307-351519
Sequence    

Annotation

kegg
ID rcu:RCOM_0937410
description phosphatidylinositol 4-kinase, putative (EC:2.7.1.67)
nr
ID XP_012069692.1
description PREDICTED: phosphatidylinositol 4-kinase alpha 1 [Jatropha curcas]
swissprot
ID Q9SXA1
description Phosphatidylinositol 4-kinase alpha 1 OS=Arabidopsis thaliana GN=PI4KA1 PE=1 SV=2
trembl
ID A0A067LCQ0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10071 PE=4 SV=1
Gene Ontology
ID GO:0005622
description phosphatidylinositol 4-kinase alpha 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59548: 319688-326144 , PASA_asmbl_59550: 326194-334191 , PASA_asmbl_59554: 334307-350947 , PASA_asmbl_59556: 346084-346421
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000082_070 0.0 - - PREDICTED: phosphatidylinositol 4-kinase alpha 1 [Jatropha curcas]
2 Hb_002631_140 0.0557903392 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 12, chloroplastic [Jatropha curcas]
3 Hb_000035_170 0.0627768302 - - PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Jatropha curcas]
4 Hb_160459_040 0.0790419902 - - hypothetical protein JCGZ_01511 [Jatropha curcas]
5 Hb_162275_040 0.0796093579 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000086_440 0.081263681 - - PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Jatropha curcas]
7 Hb_009771_110 0.0822910533 - - PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2 [Jatropha curcas]
8 Hb_012053_080 0.084311431 - - AP-2 complex subunit alpha, putative [Ricinus communis]
9 Hb_006501_090 0.0864186179 - - PREDICTED: golgin candidate 1 [Jatropha curcas]
10 Hb_001318_070 0.0867997114 transcription factor TF Family: SBP conserved hypothetical protein [Ricinus communis]
11 Hb_004920_090 0.0874988388 - - PREDICTED: probable glutamyl endopeptidase, chloroplastic isoform X1 [Jatropha curcas]
12 Hb_000035_410 0.0880197978 - - PREDICTED: eukaryotic translation initiation factor 3 subunit B-like [Jatropha curcas]
13 Hb_089140_050 0.0892767247 - - hypothetical protein JCGZ_07485 [Jatropha curcas]
14 Hb_000086_150 0.08934233 transcription factor TF Family: Jumonji PREDICTED: putative lysine-specific demethylase JMJ16 isoform X1 [Jatropha curcas]
15 Hb_098209_010 0.0914568012 - - ATP synthase subunit beta vacuolar, putative [Ricinus communis]
16 Hb_009486_080 0.0917734041 - - PREDICTED: uncharacterized protein LOC105643242 [Jatropha curcas]
17 Hb_000563_420 0.092060001 - - PREDICTED: acyl-CoA dehydrogenase family member 10 [Jatropha curcas]
18 Hb_004800_180 0.092363384 - - PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Populus euphratica]
19 Hb_000261_030 0.0931009397 - - PREDICTED: uncharacterized protein LOC105633147 [Jatropha curcas]
20 Hb_005053_010 0.0932504605 - - PREDICTED: protease Do-like 9 [Jatropha curcas]

Gene co-expression network

sample Hb_000082_070 Hb_000082_070 Hb_002631_140 Hb_002631_140 Hb_000082_070--Hb_002631_140 Hb_000035_170 Hb_000035_170 Hb_000082_070--Hb_000035_170 Hb_160459_040 Hb_160459_040 Hb_000082_070--Hb_160459_040 Hb_162275_040 Hb_162275_040 Hb_000082_070--Hb_162275_040 Hb_000086_440 Hb_000086_440 Hb_000082_070--Hb_000086_440 Hb_009771_110 Hb_009771_110 Hb_000082_070--Hb_009771_110 Hb_002631_140--Hb_009771_110 Hb_002631_140--Hb_160459_040 Hb_143489_010 Hb_143489_010 Hb_002631_140--Hb_143489_010 Hb_000261_030 Hb_000261_030 Hb_002631_140--Hb_000261_030 Hb_001789_040 Hb_001789_040 Hb_002631_140--Hb_001789_040 Hb_006501_090 Hb_006501_090 Hb_000035_170--Hb_006501_090 Hb_012053_080 Hb_012053_080 Hb_000035_170--Hb_012053_080 Hb_003645_060 Hb_003645_060 Hb_000035_170--Hb_003645_060 Hb_000563_130 Hb_000563_130 Hb_000035_170--Hb_000563_130 Hb_001655_030 Hb_001655_030 Hb_000035_170--Hb_001655_030 Hb_005053_010 Hb_005053_010 Hb_160459_040--Hb_005053_010 Hb_160459_040--Hb_009771_110 Hb_160459_040--Hb_012053_080 Hb_160459_040--Hb_000261_030 Hb_028872_070 Hb_028872_070 Hb_160459_040--Hb_028872_070 Hb_162275_040--Hb_000086_440 Hb_002539_110 Hb_002539_110 Hb_162275_040--Hb_002539_110 Hb_001109_060 Hb_001109_060 Hb_162275_040--Hb_001109_060 Hb_010272_010 Hb_010272_010 Hb_162275_040--Hb_010272_010 Hb_005227_010 Hb_005227_010 Hb_162275_040--Hb_005227_010 Hb_006355_020 Hb_006355_020 Hb_162275_040--Hb_006355_020 Hb_000086_440--Hb_001109_060 Hb_000086_440--Hb_005227_010 Hb_000086_440--Hb_000035_170 Hb_132840_110 Hb_132840_110 Hb_000086_440--Hb_132840_110 Hb_000086_440--Hb_006501_090 Hb_006618_090 Hb_006618_090 Hb_009771_110--Hb_006618_090 Hb_009771_110--Hb_005053_010 Hb_007929_080 Hb_007929_080 Hb_009771_110--Hb_007929_080 Hb_002571_030 Hb_002571_030 Hb_009771_110--Hb_002571_030 Hb_000523_080 Hb_000523_080 Hb_009771_110--Hb_000523_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.3942 5.51521 6.38203 4.72943 7.09296 7.64947
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.22428 1.5879 3.62583 5.28154 8.61178

CAGE analysis