Hb_000062_130

Information

Type -
Description -
Location Contig62: 107454-112422
Sequence    

Annotation

kegg
ID rcu:RCOM_1082470
description cytochrome P450, putative (EC:1.14.13.68)
nr
ID XP_002515012.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID D5JBX1
description Germacrene A oxidase OS=Barnadesia spinosa PE=1 SV=1
trembl
ID B9RMP3
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1082470 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 71a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51411: 111406-111533
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000062_130 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_001141_350 0.1118497249 - - hypothetical protein JCGZ_02174 [Jatropha curcas]
3 Hb_000836_090 0.1148123203 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
4 Hb_033006_020 0.1178167383 - - Aspartate aminotransferase, putative [Ricinus communis]
5 Hb_000181_330 0.1270224088 - - ubiquitin ligase protein cop1, putative [Ricinus communis]
6 Hb_001936_190 0.1288827136 - - hypothetical protein JCGZ_17780 [Jatropha curcas]
7 Hb_000243_060 0.1374153238 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 5-like [Jatropha curcas]
8 Hb_007130_020 0.1375350547 - - -
9 Hb_002311_280 0.1407819473 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
10 Hb_010534_040 0.141308424 - - PREDICTED: uncharacterized protein LOC105644385 isoform X1 [Jatropha curcas]
11 Hb_003071_050 0.1424000365 transcription factor TF Family: ERF ethylene-responsive element binding protein 2 [Hevea brasiliensis]
12 Hb_000049_280 0.1426980244 - - PREDICTED: ribokinase-like isoform X4 [Jatropha curcas]
13 Hb_000465_020 0.1454287518 - - PREDICTED: uncharacterized protein LOC105632280 [Jatropha curcas]
14 Hb_000645_260 0.1461128647 - - PREDICTED: uncharacterized protein LOC105643508 [Jatropha curcas]
15 Hb_044653_050 0.1463355503 - - PREDICTED: CTL-like protein DDB_G0274487 isoform X1 [Jatropha curcas]
16 Hb_000260_410 0.1477516893 - - PREDICTED: protein LURP-one-related 8 [Jatropha curcas]
17 Hb_001366_390 0.1488316331 - - PREDICTED: uncharacterized protein LOC105642722 [Jatropha curcas]
18 Hb_001352_030 0.1514883115 - - PREDICTED: uncharacterized protein LOC105636310 [Jatropha curcas]
19 Hb_000173_270 0.1527090343 - - PREDICTED: mitogen-activated protein kinase 15 isoform X2 [Jatropha curcas]
20 Hb_001100_070 0.1532088218 - - PREDICTED: ferredoxin--nitrite reductase, chloroplastic isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000062_130 Hb_000062_130 Hb_001141_350 Hb_001141_350 Hb_000062_130--Hb_001141_350 Hb_000836_090 Hb_000836_090 Hb_000062_130--Hb_000836_090 Hb_033006_020 Hb_033006_020 Hb_000062_130--Hb_033006_020 Hb_000181_330 Hb_000181_330 Hb_000062_130--Hb_000181_330 Hb_001936_190 Hb_001936_190 Hb_000062_130--Hb_001936_190 Hb_000243_060 Hb_000243_060 Hb_000062_130--Hb_000243_060 Hb_001141_350--Hb_000836_090 Hb_001141_350--Hb_001936_190 Hb_000645_260 Hb_000645_260 Hb_001141_350--Hb_000645_260 Hb_001141_350--Hb_000181_330 Hb_000465_020 Hb_000465_020 Hb_001141_350--Hb_000465_020 Hb_000836_090--Hb_033006_020 Hb_002053_180 Hb_002053_180 Hb_000836_090--Hb_002053_180 Hb_007130_020 Hb_007130_020 Hb_000836_090--Hb_007130_020 Hb_000905_100 Hb_000905_100 Hb_000836_090--Hb_000905_100 Hb_000002_370 Hb_000002_370 Hb_000836_090--Hb_000002_370 Hb_000199_040 Hb_000199_040 Hb_000836_090--Hb_000199_040 Hb_033006_020--Hb_000645_260 Hb_002311_280 Hb_002311_280 Hb_033006_020--Hb_002311_280 Hb_001377_120 Hb_001377_120 Hb_033006_020--Hb_001377_120 Hb_033006_020--Hb_007130_020 Hb_033006_020--Hb_000465_020 Hb_000181_330--Hb_000243_060 Hb_000322_030 Hb_000322_030 Hb_000181_330--Hb_000322_030 Hb_000181_330--Hb_002311_280 Hb_000272_030 Hb_000272_030 Hb_000181_330--Hb_000272_030 Hb_004531_170 Hb_004531_170 Hb_000181_330--Hb_004531_170 Hb_000173_270 Hb_000173_270 Hb_000181_330--Hb_000173_270 Hb_000922_160 Hb_000922_160 Hb_001936_190--Hb_000922_160 Hb_028008_040 Hb_028008_040 Hb_001936_190--Hb_028008_040 Hb_005725_240 Hb_005725_240 Hb_001936_190--Hb_005725_240 Hb_001936_190--Hb_004531_170 Hb_003580_050 Hb_003580_050 Hb_001936_190--Hb_003580_050 Hb_005365_010 Hb_005365_010 Hb_001936_190--Hb_005365_010 Hb_010868_040 Hb_010868_040 Hb_000243_060--Hb_010868_040 Hb_002078_390 Hb_002078_390 Hb_000243_060--Hb_002078_390 Hb_000227_400 Hb_000227_400 Hb_000243_060--Hb_000227_400 Hb_010381_040 Hb_010381_040 Hb_000243_060--Hb_010381_040 Hb_000926_040 Hb_000926_040 Hb_000243_060--Hb_000926_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0393373 1.52926 3.92508 2.70551 0.092146 0.160773
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.28315 0 0.298505 2.71451

CAGE analysis