Hb_000003_360

Information

Type -
Description -
Location Contig3: 210711-215726
Sequence    

Annotation

kegg
ID cmo:103483018
description probable inactive purple acid phosphatase 27
nr
ID KHN11728.1
description Putative inactive purple acid phosphatase 27 [Glycine soja]
swissprot
ID Q5MAU8
description Probable inactive purple acid phosphatase 27 OS=Arabidopsis thaliana GN=PAP27 PE=2 SV=1
trembl
ID A0A0B2PVH0
description Purple acid phosphatase OS=Glycine soja GN=glysoja_006181 PE=3 SV=1
Gene Ontology
ID GO:0003993
description probable inactive purple acid phosphatase 27

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31408: 212052-212371
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000003_360 0.0 - - Putative inactive purple acid phosphatase 27 [Glycine soja]
2 Hb_000402_100 0.2478417119 - - PREDICTED: L-tryptophan--pyruvate aminotransferase 1 [Jatropha curcas]
3 Hb_000156_210 0.2580256999 - - PREDICTED: metal transporter Nramp1 [Jatropha curcas]
4 Hb_000191_080 0.2614083852 - - PREDICTED: uncharacterized protein LOC105637945 [Jatropha curcas]
5 Hb_001435_020 0.268959888 - - hypothetical protein JCGZ_22466 [Jatropha curcas]
6 Hb_101430_010 0.2700110806 - - -
7 Hb_000530_120 0.2707101468 - - copper transport protein ATOX1 [Hevea brasiliensis]
8 Hb_002759_110 0.2738706657 - - RNA-binding family protein, putative isoform 1 [Theobroma cacao]
9 Hb_101133_020 0.2748626025 - - PREDICTED: 15.7 kDa heat shock protein, peroxisomal [Jatropha curcas]
10 Hb_003688_070 0.2752036081 - - PREDICTED: mitochondrial substrate carrier family protein E [Jatropha curcas]
11 Hb_001401_080 0.2858788734 - - PREDICTED: protein TIC 22, chloroplastic [Jatropha curcas]
12 Hb_001490_030 0.287403485 - - PREDICTED: psbP domain-containing protein 6, chloroplastic [Jatropha curcas]
13 Hb_001411_040 0.2876816083 - - hypothetical protein VITISV_010644 [Vitis vinifera]
14 Hb_000270_610 0.2893751815 - - PREDICTED: uncharacterized protein At5g50100, mitochondrial [Jatropha curcas]
15 Hb_007220_010 0.2919891086 - - PREDICTED: methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [Jatropha curcas]
16 Hb_001712_020 0.2939909343 - - PREDICTED: uncharacterized protein LOC105641948 [Jatropha curcas]
17 Hb_116020_010 0.297181568 - - Uncharacterized protein TCM_023639 [Theobroma cacao]
18 Hb_000622_240 0.2980397739 - - PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Jatropha curcas]
19 Hb_003849_270 0.2980469994 - - -
20 Hb_000376_160 0.2987396348 - - -

Gene co-expression network

sample Hb_000003_360 Hb_000003_360 Hb_000402_100 Hb_000402_100 Hb_000003_360--Hb_000402_100 Hb_000156_210 Hb_000156_210 Hb_000003_360--Hb_000156_210 Hb_000191_080 Hb_000191_080 Hb_000003_360--Hb_000191_080 Hb_001435_020 Hb_001435_020 Hb_000003_360--Hb_001435_020 Hb_101430_010 Hb_101430_010 Hb_000003_360--Hb_101430_010 Hb_000530_120 Hb_000530_120 Hb_000003_360--Hb_000530_120 Hb_001204_020 Hb_001204_020 Hb_000402_100--Hb_001204_020 Hb_001411_040 Hb_001411_040 Hb_000402_100--Hb_001411_040 Hb_006452_230 Hb_006452_230 Hb_000402_100--Hb_006452_230 Hb_000175_190 Hb_000175_190 Hb_000402_100--Hb_000175_190 Hb_002759_110 Hb_002759_110 Hb_000402_100--Hb_002759_110 Hb_007632_170 Hb_007632_170 Hb_000156_210--Hb_007632_170 Hb_019040_030 Hb_019040_030 Hb_000156_210--Hb_019040_030 Hb_000156_210--Hb_000191_080 Hb_005846_030 Hb_005846_030 Hb_000156_210--Hb_005846_030 Hb_008698_010 Hb_008698_010 Hb_000156_210--Hb_008698_010 Hb_002078_300 Hb_002078_300 Hb_000156_210--Hb_002078_300 Hb_003688_070 Hb_003688_070 Hb_000191_080--Hb_003688_070 Hb_000191_080--Hb_007632_170 Hb_000191_080--Hb_019040_030 Hb_000162_120 Hb_000162_120 Hb_000191_080--Hb_000162_120 Hb_000500_050 Hb_000500_050 Hb_000191_080--Hb_000500_050 Hb_000622_240 Hb_000622_240 Hb_001435_020--Hb_000622_240 Hb_003349_030 Hb_003349_030 Hb_001435_020--Hb_003349_030 Hb_001712_020 Hb_001712_020 Hb_001435_020--Hb_001712_020 Hb_001790_030 Hb_001790_030 Hb_001435_020--Hb_001790_030 Hb_001435_020--Hb_005846_030 Hb_000390_110 Hb_000390_110 Hb_001435_020--Hb_000390_110 Hb_002713_080 Hb_002713_080 Hb_101430_010--Hb_002713_080 Hb_024714_050 Hb_024714_050 Hb_101430_010--Hb_024714_050 Hb_000159_070 Hb_000159_070 Hb_101430_010--Hb_000159_070 Hb_076693_040 Hb_076693_040 Hb_101430_010--Hb_076693_040 Hb_000320_180 Hb_000320_180 Hb_101430_010--Hb_000320_180 Hb_000723_250 Hb_000723_250 Hb_101430_010--Hb_000723_250 Hb_003849_270 Hb_003849_270 Hb_000530_120--Hb_003849_270 Hb_000318_160 Hb_000318_160 Hb_000530_120--Hb_000318_160 Hb_000445_490 Hb_000445_490 Hb_000530_120--Hb_000445_490 Hb_010402_050 Hb_010402_050 Hb_000530_120--Hb_010402_050 Hb_003050_280 Hb_003050_280 Hb_000530_120--Hb_003050_280 Hb_000270_610 Hb_000270_610 Hb_000530_120--Hb_000270_610
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.29967 0.244757 0.919092 0.646768 0.468622 0.327225
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.80037 7.88088 0.362716 0.48517 6.37498

CAGE analysis