Hb_101430_010

Information

Type -
Description -
Location Contig101430: 974-2159
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_101430_010 0.0 - - -
2 Hb_002713_080 0.1581192989 - - glycine-rich RNA-binding protein, putative [Ricinus communis]
3 Hb_024714_050 0.1686212638 - - hypothetical protein CICLE_v100188992mg, partial [Citrus clementina]
4 Hb_000159_070 0.1711062541 - - JHL03K20.4 [Jatropha curcas]
5 Hb_076693_040 0.1789806102 - - PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B [Tarenaya hassleriana]
6 Hb_000320_180 0.1858249653 - - PREDICTED: uncharacterized protein LOC105649315 [Jatropha curcas]
7 Hb_000723_250 0.1937691023 - - hypothetical protein JCGZ_16520 [Jatropha curcas]
8 Hb_009158_020 0.1944466985 - - PREDICTED: uncharacterized membrane protein At1g16860-like [Jatropha curcas]
9 Hb_004871_040 0.1957107655 - - PREDICTED: tRNA (guanine-N(7)-)-methyltransferase [Jatropha curcas]
10 Hb_000270_610 0.1960116689 - - PREDICTED: uncharacterized protein At5g50100, mitochondrial [Jatropha curcas]
11 Hb_002897_080 0.1964465302 - - hypothetical protein JCGZ_03306 [Jatropha curcas]
12 Hb_009384_020 0.1985125842 - - hypothetical protein JCGZ_24168 [Jatropha curcas]
13 Hb_000599_280 0.2010414265 - - PREDICTED: 60S ribosomal protein L14-1 [Jatropha curcas]
14 Hb_003125_190 0.2020800563 - - hypothetical protein POPTR_0015s10960g [Populus trichocarpa]
15 Hb_001304_140 0.2027395352 - - PREDICTED: transmembrane protein 256 homolog [Jatropha curcas]
16 Hb_007441_300 0.2049351255 - - ATP binding protein, putative [Ricinus communis]
17 Hb_010582_010 0.205023511 - - hypothetical protein POPTR_0011s15670g [Populus trichocarpa]
18 Hb_004846_090 0.2055630302 transcription factor TF Family: HMG HMG-box DNA-binding family protein isoform 1 [Theobroma cacao]
19 Hb_002391_220 0.2064359981 - - PREDICTED: UPF0548 protein At2g17695 [Jatropha curcas]
20 Hb_000384_130 0.2070835574 - - uridylate kinase plant, putative [Ricinus communis]

Gene co-expression network

sample Hb_101430_010 Hb_101430_010 Hb_002713_080 Hb_002713_080 Hb_101430_010--Hb_002713_080 Hb_024714_050 Hb_024714_050 Hb_101430_010--Hb_024714_050 Hb_000159_070 Hb_000159_070 Hb_101430_010--Hb_000159_070 Hb_076693_040 Hb_076693_040 Hb_101430_010--Hb_076693_040 Hb_000320_180 Hb_000320_180 Hb_101430_010--Hb_000320_180 Hb_000723_250 Hb_000723_250 Hb_101430_010--Hb_000723_250 Hb_009384_020 Hb_009384_020 Hb_002713_080--Hb_009384_020 Hb_000676_160 Hb_000676_160 Hb_002713_080--Hb_000676_160 Hb_000046_560 Hb_000046_560 Hb_002713_080--Hb_000046_560 Hb_000160_180 Hb_000160_180 Hb_002713_080--Hb_000160_180 Hb_004871_040 Hb_004871_040 Hb_002713_080--Hb_004871_040 Hb_003053_010 Hb_003053_010 Hb_002713_080--Hb_003053_010 Hb_024714_050--Hb_000320_180 Hb_004846_090 Hb_004846_090 Hb_024714_050--Hb_004846_090 Hb_003349_080 Hb_003349_080 Hb_024714_050--Hb_003349_080 Hb_000318_160 Hb_000318_160 Hb_024714_050--Hb_000318_160 Hb_003336_030 Hb_003336_030 Hb_024714_050--Hb_003336_030 Hb_003050_280 Hb_003050_280 Hb_024714_050--Hb_003050_280 Hb_000159_070--Hb_009384_020 Hb_000159_070--Hb_076693_040 Hb_003988_040 Hb_003988_040 Hb_000159_070--Hb_003988_040 Hb_019516_100 Hb_019516_100 Hb_000159_070--Hb_019516_100 Hb_000172_420 Hb_000172_420 Hb_000159_070--Hb_000172_420 Hb_002897_080 Hb_002897_080 Hb_000159_070--Hb_002897_080 Hb_001304_140 Hb_001304_140 Hb_076693_040--Hb_001304_140 Hb_002391_220 Hb_002391_220 Hb_076693_040--Hb_002391_220 Hb_076693_040--Hb_009384_020 Hb_076693_040--Hb_000172_420 Hb_000270_720 Hb_000270_720 Hb_076693_040--Hb_000270_720 Hb_138585_050 Hb_138585_050 Hb_000320_180--Hb_138585_050 Hb_004459_040 Hb_004459_040 Hb_000320_180--Hb_004459_040 Hb_000042_200 Hb_000042_200 Hb_000320_180--Hb_000042_200 Hb_002687_170 Hb_002687_170 Hb_000320_180--Hb_002687_170 Hb_000320_180--Hb_004846_090 Hb_000723_250--Hb_000042_200 Hb_003777_210 Hb_003777_210 Hb_000723_250--Hb_003777_210 Hb_001953_090 Hb_001953_090 Hb_000723_250--Hb_001953_090 Hb_000723_250--Hb_000320_180 Hb_000045_250 Hb_000045_250 Hb_000723_250--Hb_000045_250 Hb_002878_010 Hb_002878_010 Hb_000723_250--Hb_002878_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.442401 0 0.454514 0.290171 0.212309 0.457925
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.32044 1.76354 0.176099 0.0861714 0.583081

CAGE analysis