Hb_168180_010

Information

Type -
Description -
Location Contig168180: 3463-4206
Sequence    

Annotation

kegg
ID rcu:RCOM_0824170
description hypothetical protein
nr
ID XP_002525845.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SIM6
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0824170 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_168180_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001486_060 0.149404258 - - PREDICTED: uncharacterized protein LOC105632622 [Jatropha curcas]
3 Hb_000818_080 0.1508706297 - - PREDICTED: monosaccharide-sensing protein 2 [Jatropha curcas]
4 Hb_002026_080 0.1542735219 desease resistance Gene Name: TIR_2 nucleoside-triphosphatase, putative [Ricinus communis]
5 Hb_039074_010 0.1588058864 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
6 Hb_001304_130 0.1691263332 transcription factor TF Family: GRAS PREDICTED: scarecrow-like transcription factor PAT1 [Jatropha curcas]
7 Hb_003371_190 0.1728249499 - - PREDICTED: beta-glucosidase 13-like [Jatropha curcas]
8 Hb_147218_010 0.1761671348 - - Disease resistance protein RPS5, putative [Ricinus communis]
9 Hb_086336_010 0.1836964556 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
10 Hb_009535_030 0.1851653923 - - CP2 [Hevea brasiliensis]
11 Hb_000473_030 0.1926799649 - - hypothetical protein JCGZ_19297 [Jatropha curcas]
12 Hb_001310_050 0.1948722808 - - PREDICTED: formin-like protein 6 [Jatropha curcas]
13 Hb_006816_420 0.1957586621 - - hypothetical protein JCGZ_23261 [Jatropha curcas]
14 Hb_170193_030 0.1965537364 - - PREDICTED: probable disease resistance protein At5g63020 [Jatropha curcas]
15 Hb_002518_180 0.1971516432 - - hypothetical protein POPTR_0001s25460g [Populus trichocarpa]
16 Hb_000028_340 0.2012888063 - - PREDICTED: potassium channel SKOR-like [Prunus mume]
17 Hb_004657_080 0.202644894 - - PREDICTED: probable inactive receptor kinase At5g67200 [Jatropha curcas]
18 Hb_000970_020 0.2036899223 - - hypothetical protein POPTR_0005s19050g [Populus trichocarpa]
19 Hb_000979_160 0.2045546774 - - hypothetical protein RCOM_0629030 [Ricinus communis]
20 Hb_002170_020 0.2063929462 transcription factor TF Family: MYB MYB transcription factor [Hevea brasiliensis]

Gene co-expression network

sample Hb_168180_010 Hb_168180_010 Hb_001486_060 Hb_001486_060 Hb_168180_010--Hb_001486_060 Hb_000818_080 Hb_000818_080 Hb_168180_010--Hb_000818_080 Hb_002026_080 Hb_002026_080 Hb_168180_010--Hb_002026_080 Hb_039074_010 Hb_039074_010 Hb_168180_010--Hb_039074_010 Hb_001304_130 Hb_001304_130 Hb_168180_010--Hb_001304_130 Hb_003371_190 Hb_003371_190 Hb_168180_010--Hb_003371_190 Hb_001486_060--Hb_000818_080 Hb_000793_040 Hb_000793_040 Hb_001486_060--Hb_000793_040 Hb_001486_060--Hb_002026_080 Hb_000483_130 Hb_000483_130 Hb_001486_060--Hb_000483_130 Hb_086336_010 Hb_086336_010 Hb_001486_060--Hb_086336_010 Hb_004657_080 Hb_004657_080 Hb_001486_060--Hb_004657_080 Hb_000818_080--Hb_000793_040 Hb_000818_080--Hb_002026_080 Hb_000818_080--Hb_003371_190 Hb_002928_120 Hb_002928_120 Hb_000818_080--Hb_002928_120 Hb_000818_080--Hb_004657_080 Hb_002026_080--Hb_000793_040 Hb_000834_040 Hb_000834_040 Hb_002026_080--Hb_000834_040 Hb_000702_060 Hb_000702_060 Hb_002026_080--Hb_000702_060 Hb_001493_020 Hb_001493_020 Hb_002026_080--Hb_001493_020 Hb_039074_010--Hb_003371_190 Hb_059741_010 Hb_059741_010 Hb_039074_010--Hb_059741_010 Hb_000244_260 Hb_000244_260 Hb_039074_010--Hb_000244_260 Hb_030565_110 Hb_030565_110 Hb_039074_010--Hb_030565_110 Hb_000679_040 Hb_000679_040 Hb_039074_010--Hb_000679_040 Hb_011310_050 Hb_011310_050 Hb_039074_010--Hb_011310_050 Hb_147218_010 Hb_147218_010 Hb_001304_130--Hb_147218_010 Hb_121992_010 Hb_121992_010 Hb_001304_130--Hb_121992_010 Hb_000875_070 Hb_000875_070 Hb_001304_130--Hb_000875_070 Hb_001304_130--Hb_086336_010 Hb_003216_070 Hb_003216_070 Hb_001304_130--Hb_003216_070 Hb_001304_130--Hb_001486_060 Hb_003371_190--Hb_030565_110 Hb_003371_190--Hb_000679_040 Hb_002072_010 Hb_002072_010 Hb_003371_190--Hb_002072_010 Hb_010381_020 Hb_010381_020 Hb_003371_190--Hb_010381_020 Hb_009535_030 Hb_009535_030 Hb_003371_190--Hb_009535_030 Hb_000254_070 Hb_000254_070 Hb_003371_190--Hb_000254_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0854934 1.43493 0.392215 3.04653 0.325018 0.281555
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.123051 0.77054 3.12592 1.5865

CAGE analysis