Hb_101133_040

Information

Type -
Description -
Location Contig101133: 27327-28797
Sequence    

Annotation

kegg
ID csv:101224430
description nudix hydrolase 18, mitochondrial-like
nr
ID XP_012086423.1
description PREDICTED: nudix hydrolase 18, mitochondrial-like [Jatropha curcas]
swissprot
ID Q9LE73
description Nudix hydrolase 4 OS=Arabidopsis thaliana GN=NUDT4 PE=1 SV=1
trembl
ID A0A067JPB2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22513 PE=3 SV=1
Gene Ontology
ID GO:0016787
description nudix hydrolase mitochondrial-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00612: 27140-28855 , PASA_asmbl_00613: 28257-28455
cDNA
(Sanger)
(ID:Location)		 027_N16.ab1: 27489-28855

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_101133_040 0.0 - - PREDICTED: nudix hydrolase 18, mitochondrial-like [Jatropha curcas]
2 Hb_002030_020 0.0787141669 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 2-like [Jatropha curcas]
3 Hb_002027_100 0.1134655389 - - conserved hypothetical protein [Ricinus communis]
4 Hb_060534_010 0.1205122814 - - diphosphoinositol polyphosphate phosphohydrolase, putative [Ricinus communis]
5 Hb_000343_050 0.1270215849 - - conserved hypothetical protein [Ricinus communis]
6 Hb_012833_010 0.1365767256 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
7 Hb_135714_010 0.141645208 - - hypothetical protein POPTR_0017s09310g, partial [Populus trichocarpa]
8 Hb_000243_290 0.1423573298 - - plastidic aldolase family protein [Populus trichocarpa]
9 Hb_005227_030 0.1453235134 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Jatropha curcas]
10 Hb_000538_250 0.1466331852 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 [Jatropha curcas]
11 Hb_006188_020 0.1491423583 - - PREDICTED: uncharacterized protein LOC105646403 [Jatropha curcas]
12 Hb_005888_050 0.1498449854 - - ATP binding protein, putative [Ricinus communis]
13 Hb_002477_200 0.1510449255 - - PREDICTED: uncharacterized protein LOC105631678 [Jatropha curcas]
14 Hb_000483_470 0.1519499778 - - PREDICTED: zeaxanthin epoxidase, chloroplastic-like isoform X1 [Jatropha curcas]
15 Hb_001442_050 0.1536744837 - - PREDICTED: NAD(P)H-quinone oxidoreductase subunit U, chloroplastic [Jatropha curcas]
16 Hb_074966_010 0.1560682276 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
17 Hb_000890_170 0.1565410383 - - PREDICTED: acyl-CoA-binding domain-containing protein 5 [Jatropha curcas]
18 Hb_000413_190 0.1583392338 - - PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic [Pyrus x bretschneideri]
19 Hb_005890_010 0.1591416644 - - PREDICTED: root phototropism protein 2 [Jatropha curcas]
20 Hb_000732_300 0.161170106 - - PREDICTED: uncharacterized protein LOC105649465 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_101133_040 Hb_101133_040 Hb_002030_020 Hb_002030_020 Hb_101133_040--Hb_002030_020 Hb_002027_100 Hb_002027_100 Hb_101133_040--Hb_002027_100 Hb_060534_010 Hb_060534_010 Hb_101133_040--Hb_060534_010 Hb_000343_050 Hb_000343_050 Hb_101133_040--Hb_000343_050 Hb_012833_010 Hb_012833_010 Hb_101133_040--Hb_012833_010 Hb_135714_010 Hb_135714_010 Hb_101133_040--Hb_135714_010 Hb_000243_290 Hb_000243_290 Hb_002030_020--Hb_000243_290 Hb_002030_020--Hb_000343_050 Hb_002477_200 Hb_002477_200 Hb_002030_020--Hb_002477_200 Hb_074966_010 Hb_074966_010 Hb_002030_020--Hb_074966_010 Hb_005890_010 Hb_005890_010 Hb_002030_020--Hb_005890_010 Hb_001442_050 Hb_001442_050 Hb_002027_100--Hb_001442_050 Hb_000483_470 Hb_000483_470 Hb_002027_100--Hb_000483_470 Hb_000345_400 Hb_000345_400 Hb_002027_100--Hb_000345_400 Hb_002027_100--Hb_060534_010 Hb_000294_020 Hb_000294_020 Hb_002027_100--Hb_000294_020 Hb_060534_010--Hb_000483_470 Hb_060534_010--Hb_012833_010 Hb_060534_010--Hb_000343_050 Hb_003767_060 Hb_003767_060 Hb_060534_010--Hb_003767_060 Hb_003373_050 Hb_003373_050 Hb_060534_010--Hb_003373_050 Hb_004017_030 Hb_004017_030 Hb_060534_010--Hb_004017_030 Hb_001677_170 Hb_001677_170 Hb_000343_050--Hb_001677_170 Hb_006188_020 Hb_006188_020 Hb_000343_050--Hb_006188_020 Hb_000343_050--Hb_005890_010 Hb_001926_070 Hb_001926_070 Hb_000343_050--Hb_001926_070 Hb_032731_010 Hb_032731_010 Hb_000343_050--Hb_032731_010 Hb_111997_010 Hb_111997_010 Hb_000343_050--Hb_111997_010 Hb_004117_370 Hb_004117_370 Hb_012833_010--Hb_004117_370 Hb_014720_140 Hb_014720_140 Hb_012833_010--Hb_014720_140 Hb_015934_060 Hb_015934_060 Hb_012833_010--Hb_015934_060 Hb_000982_100 Hb_000982_100 Hb_012833_010--Hb_000982_100 Hb_000313_250 Hb_000313_250 Hb_012833_010--Hb_000313_250 Hb_005888_050 Hb_005888_050 Hb_135714_010--Hb_005888_050 Hb_008202_010 Hb_008202_010 Hb_135714_010--Hb_008202_010 Hb_135714_010--Hb_074966_010 Hb_005227_030 Hb_005227_030 Hb_135714_010--Hb_005227_030 Hb_031685_010 Hb_031685_010 Hb_135714_010--Hb_031685_010 Hb_135714_010--Hb_000343_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.901372 22.4219 65.7488 13.4988 1.3035 0.536636
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.918899 0.774159 0.187071 0.563626 36.3357

CAGE analysis