Hb_096499_010

Information

Type -
Description -
Location Contig96499: 46-501
Sequence    

Annotation

kegg
ID pop:POPTR_0019s09630g
description hypothetical protein
nr
ID KDP31608.1
description hypothetical protein JCGZ_14833 [Jatropha curcas]
swissprot
ID O23530
description Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis thaliana GN=SNC1 PE=1 SV=3
trembl
ID A0A067K9B1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14833 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_096499_010 0.0 - - hypothetical protein JCGZ_14833 [Jatropha curcas]
2 Hb_000455_070 0.160427108 - - PREDICTED: LOW QUALITY PROTEIN: carboxymethylenebutenolidase homolog [Jatropha curcas]
3 Hb_004449_090 0.1725395805 - - PREDICTED: CO(2)-response secreted protease-like [Jatropha curcas]
4 Hb_030565_050 0.191272574 - - UDP-D-GLUCURONATE 4-EPIMERASE 6 family protein [Populus trichocarpa]
5 Hb_000028_580 0.1978417674 - - PREDICTED: glutamate decarboxylase 5-like [Jatropha curcas]
6 Hb_003952_080 0.2004022267 - - zinc finger protein, putative [Ricinus communis]
7 Hb_002110_290 0.2020537301 - - ring finger protein, putative [Ricinus communis]
8 Hb_000300_230 0.202142402 - - PREDICTED: cation/calcium exchanger 2 [Jatropha curcas]
9 Hb_005539_140 0.2024066538 - - PREDICTED: U-box domain-containing protein 19-like [Jatropha curcas]
10 Hb_001221_290 0.2054059972 - - hypothetical protein RCOM_1506010 [Ricinus communis]
11 Hb_186495_010 0.2055925014 - - Phosphoprotein phosphatase [Theobroma cacao]
12 Hb_000028_550 0.2067900662 - - unknown [Medicago truncatula]
13 Hb_072153_010 0.2083982395 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
14 Hb_001404_080 0.2092205266 - - conserved hypothetical protein [Ricinus communis]
15 Hb_005489_150 0.2103827105 - - hypothetical protein JCGZ_20759 [Jatropha curcas]
16 Hb_000684_220 0.210621284 - - PREDICTED: interactor of constitutive active ROPs 2, chloroplastic isoform X1 [Jatropha curcas]
17 Hb_004757_050 0.2130740857 - - -
18 Hb_000805_140 0.2139612146 transcription factor TF Family: GRAS Chitin-inducible gibberellin-responsive protein, putative [Ricinus communis]
19 Hb_002173_030 0.2157906547 - - hypothetical protein JCGZ_12466 [Jatropha curcas]
20 Hb_000302_100 0.2165372833 - - PREDICTED: uncharacterized protein LOC105766209 [Gossypium raimondii]

Gene co-expression network

sample Hb_096499_010 Hb_096499_010 Hb_000455_070 Hb_000455_070 Hb_096499_010--Hb_000455_070 Hb_004449_090 Hb_004449_090 Hb_096499_010--Hb_004449_090 Hb_030565_050 Hb_030565_050 Hb_096499_010--Hb_030565_050 Hb_000028_580 Hb_000028_580 Hb_096499_010--Hb_000028_580 Hb_003952_080 Hb_003952_080 Hb_096499_010--Hb_003952_080 Hb_002110_290 Hb_002110_290 Hb_096499_010--Hb_002110_290 Hb_003470_110 Hb_003470_110 Hb_000455_070--Hb_003470_110 Hb_005539_140 Hb_005539_140 Hb_000455_070--Hb_005539_140 Hb_030565_100 Hb_030565_100 Hb_000455_070--Hb_030565_100 Hb_000455_070--Hb_002110_290 Hb_000236_180 Hb_000236_180 Hb_000455_070--Hb_000236_180 Hb_001195_090 Hb_001195_090 Hb_000455_070--Hb_001195_090 Hb_160405_010 Hb_160405_010 Hb_004449_090--Hb_160405_010 Hb_004449_090--Hb_030565_050 Hb_004449_090--Hb_000028_580 Hb_000300_230 Hb_000300_230 Hb_004449_090--Hb_000300_230 Hb_002289_150 Hb_002289_150 Hb_004449_090--Hb_002289_150 Hb_011828_010 Hb_011828_010 Hb_004449_090--Hb_011828_010 Hb_014361_090 Hb_014361_090 Hb_030565_050--Hb_014361_090 Hb_000684_220 Hb_000684_220 Hb_030565_050--Hb_000684_220 Hb_030565_050--Hb_005539_140 Hb_000176_080 Hb_000176_080 Hb_030565_050--Hb_000176_080 Hb_000603_020 Hb_000603_020 Hb_030565_050--Hb_000603_020 Hb_000028_550 Hb_000028_550 Hb_000028_580--Hb_000028_550 Hb_002097_080 Hb_002097_080 Hb_000028_580--Hb_002097_080 Hb_000479_060 Hb_000479_060 Hb_000028_580--Hb_000479_060 Hb_154038_040 Hb_154038_040 Hb_000028_580--Hb_154038_040 Hb_135720_010 Hb_135720_010 Hb_000028_580--Hb_135720_010 Hb_000733_090 Hb_000733_090 Hb_003952_080--Hb_000733_090 Hb_005227_050 Hb_005227_050 Hb_003952_080--Hb_005227_050 Hb_000007_470 Hb_000007_470 Hb_003952_080--Hb_000007_470 Hb_049915_010 Hb_049915_010 Hb_003952_080--Hb_049915_010 Hb_108216_030 Hb_108216_030 Hb_003952_080--Hb_108216_030 Hb_023768_010 Hb_023768_010 Hb_003952_080--Hb_023768_010 Hb_001186_110 Hb_001186_110 Hb_002110_290--Hb_001186_110 Hb_000300_420 Hb_000300_420 Hb_002110_290--Hb_000300_420 Hb_002909_110 Hb_002909_110 Hb_002110_290--Hb_002909_110 Hb_003185_070 Hb_003185_070 Hb_002110_290--Hb_003185_070 Hb_000054_010 Hb_000054_010 Hb_002110_290--Hb_000054_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.352555 2.39272 0.376375 9.12218 0.197391 0.846465
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.784182 0.123194 0.20444 0.672395 2.02687

CAGE analysis