Hb_000007_470

Information

Type -
Description -
Location Contig7: 436645-441629
Sequence    

Annotation

kegg
ID tcc:TCM_011897
description EXS family protein
nr
ID XP_012081998.1
description PREDICTED: phosphate transporter PHO1 homolog 1 [Jatropha curcas]
swissprot
ID Q93ZF5
description Phosphate transporter PHO1 homolog 1 OS=Arabidopsis thaliana GN=PHO1-H1 PE=2 SV=1
trembl
ID A0A067KAQ0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18256 PE=4 SV=1
Gene Ontology
ID GO:0016021
description phosphate transporter pho1 homolog 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54779: 439534-440269
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000007_470 0.0 - - PREDICTED: phosphate transporter PHO1 homolog 1 [Jatropha curcas]
2 Hb_000007_020 0.1182118829 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
3 Hb_000201_050 0.1272428495 - - -
4 Hb_000227_350 0.133736456 - - hypothetical protein CICLE_v10006537mg [Citrus clementina]
5 Hb_021443_010 0.1381840896 - - PREDICTED: cleavage and polyadenylation specificity factor subunit 1 [Jatropha curcas]
6 Hb_003711_050 0.1402224402 - - Isoflavone reductase, putative [Ricinus communis]
7 Hb_111985_090 0.1407231736 - - hypothetical protein RCOM_1595950 [Ricinus communis]
8 Hb_001502_010 0.1415304995 - - hypothetical protein JCGZ_04288 [Jatropha curcas]
9 Hb_008200_010 0.1421533322 - - PREDICTED: ABC transporter G family member 14-like isoform X1 [Jatropha curcas]
10 Hb_001584_250 0.1435848038 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
11 Hb_006590_040 0.1458492713 - - amino acid permease, putative [Ricinus communis]
12 Hb_003906_150 0.1488753403 - - peptidoglycan-binding LysM domain-containing family protein, partial [Populus trichocarpa]
13 Hb_008566_070 0.1491479671 - - conserved hypothetical protein [Ricinus communis]
14 Hb_032260_040 0.1528271841 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000349_280 0.1528447768 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002116_020 0.1546313222 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 35 [Jatropha curcas]
17 Hb_000422_060 0.1552518926 transcription factor TF Family: OFP hypothetical protein RCOM_1282480 [Ricinus communis]
18 Hb_032299_020 0.1563396755 - - tonoplast intrinsic protein, putative [Ricinus communis]
19 Hb_000429_080 0.157787046 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000983_110 0.1597100565 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]

Gene co-expression network

sample Hb_000007_470 Hb_000007_470 Hb_000007_020 Hb_000007_020 Hb_000007_470--Hb_000007_020 Hb_000201_050 Hb_000201_050 Hb_000007_470--Hb_000201_050 Hb_000227_350 Hb_000227_350 Hb_000007_470--Hb_000227_350 Hb_021443_010 Hb_021443_010 Hb_000007_470--Hb_021443_010 Hb_003711_050 Hb_003711_050 Hb_000007_470--Hb_003711_050 Hb_111985_090 Hb_111985_090 Hb_000007_470--Hb_111985_090 Hb_008200_010 Hb_008200_010 Hb_000007_020--Hb_008200_010 Hb_006590_040 Hb_006590_040 Hb_000007_020--Hb_006590_040 Hb_001584_250 Hb_001584_250 Hb_000007_020--Hb_001584_250 Hb_001502_010 Hb_001502_010 Hb_000007_020--Hb_001502_010 Hb_002116_020 Hb_002116_020 Hb_000007_020--Hb_002116_020 Hb_000007_020--Hb_000201_050 Hb_000201_050--Hb_003711_050 Hb_032260_040 Hb_032260_040 Hb_000201_050--Hb_032260_040 Hb_000201_050--Hb_001584_250 Hb_000201_050--Hb_001502_010 Hb_027746_030 Hb_027746_030 Hb_000201_050--Hb_027746_030 Hb_000422_060 Hb_000422_060 Hb_000201_050--Hb_000422_060 Hb_000227_350--Hb_000201_050 Hb_008566_070 Hb_008566_070 Hb_000227_350--Hb_008566_070 Hb_002170_010 Hb_002170_010 Hb_000227_350--Hb_002170_010 Hb_002186_170 Hb_002186_170 Hb_000227_350--Hb_002186_170 Hb_128216_010 Hb_128216_010 Hb_000227_350--Hb_128216_010 Hb_080601_010 Hb_080601_010 Hb_000227_350--Hb_080601_010 Hb_021443_010--Hb_003711_050 Hb_000438_180 Hb_000438_180 Hb_021443_010--Hb_000438_180 Hb_021443_010--Hb_032260_040 Hb_021443_010--Hb_001584_250 Hb_001401_110 Hb_001401_110 Hb_021443_010--Hb_001401_110 Hb_021443_010--Hb_000201_050 Hb_003711_050--Hb_032260_040 Hb_003711_050--Hb_000438_180 Hb_003711_050--Hb_001584_250 Hb_000853_140 Hb_000853_140 Hb_003711_050--Hb_000853_140 Hb_111985_090--Hb_008566_070 Hb_003906_150 Hb_003906_150 Hb_111985_090--Hb_003906_150 Hb_111985_090--Hb_006590_040 Hb_005054_010 Hb_005054_010 Hb_111985_090--Hb_005054_010 Hb_111985_090--Hb_002116_020 Hb_005643_080 Hb_005643_080 Hb_111985_090--Hb_005643_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0106433 2.16415 0.214923 5.7577 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0780259 0.015349 0.0584055 0.0426957 0.683659

CAGE analysis