Hb_049915_010

Information

Type -
Description -
Location Contig49915: 5502-6063
Sequence    

Annotation

kegg
ID rcu:RCOM_0922740
description hypothetical protein
nr
ID XP_012076490.1
description PREDICTED: uncharacterized serine-rich protein C215.13 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KBN4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07128 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_049915_010 0.0 - - PREDICTED: uncharacterized serine-rich protein C215.13 [Jatropha curcas]
2 Hb_000733_090 0.0934513085 - - PREDICTED: putative lipid-transfer protein DIR1 [Jatropha curcas]
3 Hb_008406_030 0.1423460225 transcription factor TF Family: ERF AP2/ERF super family protein [Hevea brasiliensis]
4 Hb_004297_080 0.1465849306 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
5 Hb_008643_020 0.1543695845 - - Cf-4/9 disease resistance-like family protein [Populus trichocarpa]
6 Hb_000172_230 0.1556541832 - - myo-inositol-1 phosphate synthase [Hevea brasiliensis]
7 Hb_002783_210 0.1564428755 - - PREDICTED: uncharacterized protein LOC105635341 [Jatropha curcas]
8 Hb_007749_020 0.1568139158 - - receptor-kinase, putative [Ricinus communis]
9 Hb_002173_030 0.1576448116 - - hypothetical protein JCGZ_12466 [Jatropha curcas]
10 Hb_001472_140 0.158032405 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
11 Hb_103149_010 0.1585079331 - - hypothetical protein CISIN_1g0397312mg, partial [Citrus sinensis]
12 Hb_000732_240 0.1622303976 - - PREDICTED: dynein light chain 1, cytoplasmic-like [Jatropha curcas]
13 Hb_000532_150 0.1638234313 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
14 Hb_001999_200 0.1661580597 transcription factor TF Family: C2H2 conserved hypothetical protein [Ricinus communis]
15 Hb_000365_280 0.1667576001 - - calcium binding protein/cast, putative [Ricinus communis]
16 Hb_000567_220 0.1670357173 - - PREDICTED: uncharacterized protein LOC105116038 [Populus euphratica]
17 Hb_001195_650 0.1693398078 - - PREDICTED: calcium uniporter protein 4, mitochondrial [Jatropha curcas]
18 Hb_001357_030 0.1721478029 - - hypothetical protein F383_04880 [Gossypium arboreum]
19 Hb_000099_190 0.1733613244 - - PREDICTED: putative cell division cycle ATPase [Jatropha curcas]
20 Hb_003952_080 0.175729123 - - zinc finger protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_049915_010 Hb_049915_010 Hb_000733_090 Hb_000733_090 Hb_049915_010--Hb_000733_090 Hb_008406_030 Hb_008406_030 Hb_049915_010--Hb_008406_030 Hb_004297_080 Hb_004297_080 Hb_049915_010--Hb_004297_080 Hb_008643_020 Hb_008643_020 Hb_049915_010--Hb_008643_020 Hb_000172_230 Hb_000172_230 Hb_049915_010--Hb_000172_230 Hb_002783_210 Hb_002783_210 Hb_049915_010--Hb_002783_210 Hb_103149_010 Hb_103149_010 Hb_000733_090--Hb_103149_010 Hb_003952_080 Hb_003952_080 Hb_000733_090--Hb_003952_080 Hb_000692_230 Hb_000692_230 Hb_000733_090--Hb_000692_230 Hb_000604_050 Hb_000604_050 Hb_000733_090--Hb_000604_050 Hb_000733_090--Hb_008406_030 Hb_004241_200 Hb_004241_200 Hb_008406_030--Hb_004241_200 Hb_009557_050 Hb_009557_050 Hb_008406_030--Hb_009557_050 Hb_001472_140 Hb_001472_140 Hb_008406_030--Hb_001472_140 Hb_001195_650 Hb_001195_650 Hb_008406_030--Hb_001195_650 Hb_008406_030--Hb_004297_080 Hb_027905_010 Hb_027905_010 Hb_008406_030--Hb_027905_010 Hb_004297_080--Hb_001472_140 Hb_000666_120 Hb_000666_120 Hb_004297_080--Hb_000666_120 Hb_002233_080 Hb_002233_080 Hb_004297_080--Hb_002233_080 Hb_000210_160 Hb_000210_160 Hb_004297_080--Hb_000210_160 Hb_001675_310 Hb_001675_310 Hb_004297_080--Hb_001675_310 Hb_008643_020--Hb_000172_230 Hb_120117_010 Hb_120117_010 Hb_008643_020--Hb_120117_010 Hb_008643_020--Hb_002783_210 Hb_101370_010 Hb_101370_010 Hb_008643_020--Hb_101370_010 Hb_008643_020--Hb_004297_080 Hb_036029_020 Hb_036029_020 Hb_000172_230--Hb_036029_020 Hb_001675_290 Hb_001675_290 Hb_000172_230--Hb_001675_290 Hb_007749_020 Hb_007749_020 Hb_000172_230--Hb_007749_020 Hb_076771_010 Hb_076771_010 Hb_000172_230--Hb_076771_010 Hb_000172_230--Hb_001675_310 Hb_003529_010 Hb_003529_010 Hb_002783_210--Hb_003529_010 Hb_001675_260 Hb_001675_260 Hb_002783_210--Hb_001675_260 Hb_002783_210--Hb_000604_050 Hb_008566_070 Hb_008566_070 Hb_002783_210--Hb_008566_070 Hb_017549_010 Hb_017549_010 Hb_002783_210--Hb_017549_010 Hb_005643_080 Hb_005643_080 Hb_002783_210--Hb_005643_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.82633 38.3386 15.8618 76.3617 1.66777 3.32713
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.81078 1.70732 1.30197 5.76378 5.57336

CAGE analysis