Hb_120117_010

Information

Type -
Description -
Location Contig120117: 143-919
Sequence    

Annotation

kegg
ID rcu:RCOM_1331600
description Disease resistance protein RFL1, putative (EC:3.1.3.16)
nr
ID XP_002521789.1
description Disease resistance protein RFL1, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S720
description Disease resistance protein RFL1, putative OS=Ricinus communis GN=RCOM_1331600 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_120117_010 0.0 - - Disease resistance protein RFL1, putative [Ricinus communis]
2 Hb_008643_020 0.1574608835 - - Cf-4/9 disease resistance-like family protein [Populus trichocarpa]
3 Hb_001277_420 0.1630929089 - - PREDICTED: protein lin-12-like isoform X2 [Populus euphratica]
4 Hb_038718_010 0.1668587216 - - Disease resistance protein RFL1, putative [Ricinus communis]
5 Hb_010642_010 0.1701450087 - - PREDICTED: aquaporin TIP2-1 [Jatropha curcas]
6 Hb_004297_080 0.1736034775 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
7 Hb_000128_090 0.176010824 - - Reticuline oxidase precursor, putative [Ricinus communis]
8 Hb_000714_070 0.1773079075 transcription factor TF Family: LOB hypothetical protein JCGZ_14754 [Jatropha curcas]
9 Hb_042491_010 0.1789043651 - - JHL06P13.14 [Jatropha curcas]
10 Hb_006550_010 0.1789575027 - - PREDICTED: vacuolar amino acid transporter 1 [Eucalyptus grandis]
11 Hb_000692_030 0.1791707302 - - nucleoredoxin, putative [Ricinus communis]
12 Hb_003387_050 0.1825943961 - - PREDICTED: uncharacterized protein LOC105639324 [Jatropha curcas]
13 Hb_049915_010 0.1841426494 - - PREDICTED: uncharacterized serine-rich protein C215.13 [Jatropha curcas]
14 Hb_000010_220 0.1848059832 - - PREDICTED: uncharacterized protein LOC105640277 [Jatropha curcas]
15 Hb_008406_030 0.1859845398 transcription factor TF Family: ERF AP2/ERF super family protein [Hevea brasiliensis]
16 Hb_003939_090 0.1864307866 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
17 Hb_001195_650 0.1877796933 - - PREDICTED: calcium uniporter protein 4, mitochondrial [Jatropha curcas]
18 Hb_030827_080 0.188597833 - - PREDICTED: uncharacterized protein LOC105648491 [Jatropha curcas]
19 Hb_002325_050 0.1892143438 transcription factor TF Family: MYB MYB transcriptional factor [Populus nigra]
20 Hb_011355_020 0.1893849413 - - extensin, proline-rich protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_120117_010 Hb_120117_010 Hb_008643_020 Hb_008643_020 Hb_120117_010--Hb_008643_020 Hb_001277_420 Hb_001277_420 Hb_120117_010--Hb_001277_420 Hb_038718_010 Hb_038718_010 Hb_120117_010--Hb_038718_010 Hb_010642_010 Hb_010642_010 Hb_120117_010--Hb_010642_010 Hb_004297_080 Hb_004297_080 Hb_120117_010--Hb_004297_080 Hb_000128_090 Hb_000128_090 Hb_120117_010--Hb_000128_090 Hb_000172_230 Hb_000172_230 Hb_008643_020--Hb_000172_230 Hb_049915_010 Hb_049915_010 Hb_008643_020--Hb_049915_010 Hb_002783_210 Hb_002783_210 Hb_008643_020--Hb_002783_210 Hb_101370_010 Hb_101370_010 Hb_008643_020--Hb_101370_010 Hb_008643_020--Hb_004297_080 Hb_006550_010 Hb_006550_010 Hb_001277_420--Hb_006550_010 Hb_005695_020 Hb_005695_020 Hb_001277_420--Hb_005695_020 Hb_002894_040 Hb_002894_040 Hb_001277_420--Hb_002894_040 Hb_000002_230 Hb_000002_230 Hb_001277_420--Hb_000002_230 Hb_183209_020 Hb_183209_020 Hb_001277_420--Hb_183209_020 Hb_002053_090 Hb_002053_090 Hb_001277_420--Hb_002053_090 Hb_038718_010--Hb_000128_090 Hb_038718_010--Hb_010642_010 Hb_002035_020 Hb_002035_020 Hb_038718_010--Hb_002035_020 Hb_170632_010 Hb_170632_010 Hb_038718_010--Hb_170632_010 Hb_011355_020 Hb_011355_020 Hb_038718_010--Hb_011355_020 Hb_033053_020 Hb_033053_020 Hb_038718_010--Hb_033053_020 Hb_030827_080 Hb_030827_080 Hb_010642_010--Hb_030827_080 Hb_002739_160 Hb_002739_160 Hb_010642_010--Hb_002739_160 Hb_008352_020 Hb_008352_020 Hb_010642_010--Hb_008352_020 Hb_003939_090 Hb_003939_090 Hb_010642_010--Hb_003939_090 Hb_001198_180 Hb_001198_180 Hb_010642_010--Hb_001198_180 Hb_001472_140 Hb_001472_140 Hb_004297_080--Hb_001472_140 Hb_008406_030 Hb_008406_030 Hb_004297_080--Hb_008406_030 Hb_000666_120 Hb_000666_120 Hb_004297_080--Hb_000666_120 Hb_002233_080 Hb_002233_080 Hb_004297_080--Hb_002233_080 Hb_000210_160 Hb_000210_160 Hb_004297_080--Hb_000210_160 Hb_001675_310 Hb_001675_310 Hb_004297_080--Hb_001675_310 Hb_148914_020 Hb_148914_020 Hb_000128_090--Hb_148914_020 Hb_145268_010 Hb_145268_010 Hb_000128_090--Hb_145268_010 Hb_001213_080 Hb_001213_080 Hb_000128_090--Hb_001213_080 Hb_000128_090--Hb_010642_010 Hb_048937_010 Hb_048937_010 Hb_000128_090--Hb_048937_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0304716 2.93543 1.66126 5.20684 0 0.139401
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.275834 0.199035 0.961158 0.220821

CAGE analysis