Hb_002783_210

Information

Type -
Description -
Location Contig2783: 203672-204082
Sequence    

Annotation

kegg
ID rcu:RCOM_1598000
description hypothetical protein
nr
ID XP_012073796.1
description PREDICTED: uncharacterized protein LOC105635341 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KKZ3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08212 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002783_210 0.0 - - PREDICTED: uncharacterized protein LOC105635341 [Jatropha curcas]
2 Hb_003529_010 0.1063871114 - - PREDICTED: disease resistance protein RPS6-like [Jatropha curcas]
3 Hb_001675_260 0.1169842492 - - nitrate transporter, putative [Ricinus communis]
4 Hb_000604_050 0.1210489833 - - PREDICTED: mechanosensitive ion channel protein 8-like [Jatropha curcas]
5 Hb_008566_070 0.1238657012 - - conserved hypothetical protein [Ricinus communis]
6 Hb_017549_010 0.1281052423 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00222 [Jatropha curcas]
7 Hb_005643_080 0.1339013574 - - hypothetical protein POPTR_0001s12740g [Populus trichocarpa]
8 Hb_000120_600 0.1353576702 - - PREDICTED: uncharacterized protein LOC105628582 [Jatropha curcas]
9 Hb_004157_060 0.1491784047 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 22-like [Jatropha curcas]
10 Hb_004374_170 0.150207802 - - PREDICTED: gibberellin 20 oxidase 1-B [Jatropha curcas]
11 Hb_001318_180 0.1505932469 - - PREDICTED: protein NIM1-INTERACTING 1 [Jatropha curcas]
12 Hb_000860_030 0.1508505765 - - conserved hypothetical protein [Ricinus communis]
13 Hb_003906_150 0.151465778 - - peptidoglycan-binding LysM domain-containing family protein, partial [Populus trichocarpa]
14 Hb_027402_110 0.1514712123 - - PREDICTED: uncharacterized protein LOC105640545 [Jatropha curcas]
15 Hb_045786_010 0.1520686803 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
16 Hb_000270_530 0.1549836438 - - hypothetical protein POPTR_0015s08220g [Populus trichocarpa]
17 Hb_049915_010 0.1564428755 - - PREDICTED: uncharacterized serine-rich protein C215.13 [Jatropha curcas]
18 Hb_004007_190 0.1575675807 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein AZF2-like [Jatropha curcas]
19 Hb_002597_030 0.1623247805 - - -
20 Hb_015884_010 0.163595726 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_002783_210 Hb_002783_210 Hb_003529_010 Hb_003529_010 Hb_002783_210--Hb_003529_010 Hb_001675_260 Hb_001675_260 Hb_002783_210--Hb_001675_260 Hb_000604_050 Hb_000604_050 Hb_002783_210--Hb_000604_050 Hb_008566_070 Hb_008566_070 Hb_002783_210--Hb_008566_070 Hb_017549_010 Hb_017549_010 Hb_002783_210--Hb_017549_010 Hb_005643_080 Hb_005643_080 Hb_002783_210--Hb_005643_080 Hb_003529_010--Hb_001675_260 Hb_004007_190 Hb_004007_190 Hb_003529_010--Hb_004007_190 Hb_001318_180 Hb_001318_180 Hb_003529_010--Hb_001318_180 Hb_000021_010 Hb_000021_010 Hb_003529_010--Hb_000021_010 Hb_003529_010--Hb_000604_050 Hb_001675_260--Hb_001318_180 Hb_027402_110 Hb_027402_110 Hb_001675_260--Hb_027402_110 Hb_001675_260--Hb_004007_190 Hb_004157_060 Hb_004157_060 Hb_001675_260--Hb_004157_060 Hb_001675_260--Hb_000604_050 Hb_003906_150 Hb_003906_150 Hb_000604_050--Hb_003906_150 Hb_000270_530 Hb_000270_530 Hb_000604_050--Hb_000270_530 Hb_000604_050--Hb_004007_190 Hb_103149_010 Hb_103149_010 Hb_000604_050--Hb_103149_010 Hb_000604_050--Hb_008566_070 Hb_111985_090 Hb_111985_090 Hb_008566_070--Hb_111985_090 Hb_008200_010 Hb_008200_010 Hb_008566_070--Hb_008200_010 Hb_008566_070--Hb_005643_080 Hb_001502_010 Hb_001502_010 Hb_008566_070--Hb_001502_010 Hb_000227_350 Hb_000227_350 Hb_008566_070--Hb_000227_350 Hb_008566_070--Hb_003906_150 Hb_001115_100 Hb_001115_100 Hb_017549_010--Hb_001115_100 Hb_000120_600 Hb_000120_600 Hb_017549_010--Hb_000120_600 Hb_002597_030 Hb_002597_030 Hb_017549_010--Hb_002597_030 Hb_004374_170 Hb_004374_170 Hb_017549_010--Hb_004374_170 Hb_002804_070 Hb_002804_070 Hb_017549_010--Hb_002804_070 Hb_029576_070 Hb_029576_070 Hb_017549_010--Hb_029576_070 Hb_006951_010 Hb_006951_010 Hb_005643_080--Hb_006951_010 Hb_005643_080--Hb_111985_090 Hb_005643_080--Hb_000604_050 Hb_000201_070 Hb_000201_070 Hb_005643_080--Hb_000201_070 Hb_010267_030 Hb_010267_030 Hb_005643_080--Hb_010267_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.184002 5.83239 2.0566 12.4353 0.156313 0.290772
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.443655 0.527269

CAGE analysis