Hb_062482_010

Information

Type -
Description -
Location Contig62482: 2118-3569
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_062482_010 0.0 - - -
2 Hb_002733_030 0.2812164887 - - PREDICTED: uncharacterized protein LOC104248159 [Nicotiana sylvestris]
3 Hb_028755_010 0.2834730727 - - PREDICTED: uncharacterized protein LOC104894399 [Beta vulgaris subsp. vulgaris]
4 Hb_003881_050 0.2834818629 - - PREDICTED: uncharacterized protein LOC104213140 [Nicotiana sylvestris]
5 Hb_004724_230 0.3025801519 - - hypothetical protein JCGZ_12701 [Jatropha curcas]
6 Hb_003446_040 0.3097608403 - - -
7 Hb_025457_010 0.3118025129 - - -
8 Hb_001703_120 0.3130588501 - - PREDICTED: uncharacterized protein LOC105116966 isoform X2 [Populus euphratica]
9 Hb_000165_150 0.3182766586 - - PREDICTED: pistil-specific extensin-like protein [Jatropha curcas]
10 Hb_176825_010 0.3190895663 - - PREDICTED: uncharacterized protein LOC105630857 isoform X2 [Jatropha curcas]
11 Hb_005656_060 0.325724674 - - -
12 Hb_123521_010 0.3287442487 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
13 Hb_002686_380 0.3342230758 - - -
14 Hb_140572_010 0.3398433172 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Jatropha curcas]
15 Hb_038011_010 0.3408967635 - - hypothetical protein POPTR_0031s004401g, partial [Populus trichocarpa]
16 Hb_001650_010 0.3419753366 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
17 Hb_010317_020 0.3437082142 - - PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Jatropha curcas]
18 Hb_000422_120 0.3440962514 - - PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Jatropha curcas]
19 Hb_015707_010 0.3466178824 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
20 Hb_001545_210 0.3468943062 - - hypothetical protein JCGZ_11132 [Jatropha curcas]

Gene co-expression network

sample Hb_062482_010 Hb_062482_010 Hb_002733_030 Hb_002733_030 Hb_062482_010--Hb_002733_030 Hb_028755_010 Hb_028755_010 Hb_062482_010--Hb_028755_010 Hb_003881_050 Hb_003881_050 Hb_062482_010--Hb_003881_050 Hb_004724_230 Hb_004724_230 Hb_062482_010--Hb_004724_230 Hb_003446_040 Hb_003446_040 Hb_062482_010--Hb_003446_040 Hb_025457_010 Hb_025457_010 Hb_062482_010--Hb_025457_010 Hb_002733_030--Hb_025457_010 Hb_002028_100 Hb_002028_100 Hb_002733_030--Hb_002028_100 Hb_002232_450 Hb_002232_450 Hb_002733_030--Hb_002232_450 Hb_002733_030--Hb_003881_050 Hb_001965_010 Hb_001965_010 Hb_002733_030--Hb_001965_010 Hb_002686_380 Hb_002686_380 Hb_002733_030--Hb_002686_380 Hb_007545_020 Hb_007545_020 Hb_028755_010--Hb_007545_020 Hb_005081_040 Hb_005081_040 Hb_028755_010--Hb_005081_040 Hb_001846_050 Hb_001846_050 Hb_028755_010--Hb_001846_050 Hb_168343_010 Hb_168343_010 Hb_028755_010--Hb_168343_010 Hb_164370_010 Hb_164370_010 Hb_028755_010--Hb_164370_010 Hb_038011_010 Hb_038011_010 Hb_003881_050--Hb_038011_010 Hb_001242_090 Hb_001242_090 Hb_003881_050--Hb_001242_090 Hb_085863_020 Hb_085863_020 Hb_003881_050--Hb_085863_020 Hb_073452_010 Hb_073452_010 Hb_003881_050--Hb_073452_010 Hb_090497_010 Hb_090497_010 Hb_003881_050--Hb_090497_010 Hb_003688_160 Hb_003688_160 Hb_003881_050--Hb_003688_160 Hb_000422_120 Hb_000422_120 Hb_004724_230--Hb_000422_120 Hb_054127_050 Hb_054127_050 Hb_004724_230--Hb_054127_050 Hb_002513_030 Hb_002513_030 Hb_004724_230--Hb_002513_030 Hb_004553_020 Hb_004553_020 Hb_004724_230--Hb_004553_020 Hb_001660_020 Hb_001660_020 Hb_004724_230--Hb_001660_020 Hb_001523_020 Hb_001523_020 Hb_004724_230--Hb_001523_020 Hb_004413_030 Hb_004413_030 Hb_003446_040--Hb_004413_030 Hb_001277_310 Hb_001277_310 Hb_003446_040--Hb_001277_310 Hb_005532_010 Hb_005532_010 Hb_003446_040--Hb_005532_010 Hb_135624_010 Hb_135624_010 Hb_003446_040--Hb_135624_010 Hb_001009_130 Hb_001009_130 Hb_003446_040--Hb_001009_130 Hb_123521_010 Hb_123521_010 Hb_003446_040--Hb_123521_010 Hb_009421_010 Hb_009421_010 Hb_025457_010--Hb_009421_010 Hb_097968_010 Hb_097968_010 Hb_025457_010--Hb_097968_010 Hb_025457_010--Hb_002232_450 Hb_025457_010--Hb_002686_380 Hb_008370_010 Hb_008370_010 Hb_025457_010--Hb_008370_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0413599 0.041326 0.012381 0.0135622 0.174334 1.10754
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 1.39005 0.119272 0.309367

CAGE analysis