Hb_000422_120

Information

Type -
Description -
Location Contig422: 178179-178826
Sequence    

Annotation

kegg
ID pop:POPTR_0003s06990g
description POPTRDRAFT_646054; hypothetical protein
nr
ID XP_012068800.1
description PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Jatropha curcas]
swissprot
ID Q9LUM0
description 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana GN=FAB1B PE=2 SV=1
trembl
ID A0A067L080
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24632 PE=4 SV=1
Gene Ontology
ID GO:0016740
description 1-phosphatidylinositol-3-phosphate 5-kinase fab1b

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41731: 177280-178702
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000422_120 0.0 - - PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Jatropha curcas]
2 Hb_004724_230 0.1503197367 - - hypothetical protein JCGZ_12701 [Jatropha curcas]
3 Hb_001817_020 0.1912031644 - - PREDICTED: F-box/kelch-repeat protein OR23 [Jatropha curcas]
4 Hb_073452_010 0.1931357295 - - PREDICTED: chaperonin CPN60-like 2, mitochondrial isoform X2 [Jatropha curcas]
5 Hb_054127_050 0.1975424468 - - PREDICTED: uncharacterized protein LOC105638784 isoform X1 [Jatropha curcas]
6 Hb_001780_120 0.2034506544 - - PREDICTED: uncharacterized protein LOC105634429 [Jatropha curcas]
7 Hb_000827_060 0.2041390128 - - hypothetical protein POPTR_2151s00200g [Populus trichocarpa]
8 Hb_001523_020 0.2090503391 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like isoform X3 [Citrus sinensis]
9 Hb_004553_020 0.2095353713 - - PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Jatropha curcas]
10 Hb_055101_010 0.2100436458 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
11 Hb_001493_180 0.2139232008 - - fyve finger-containing phosphoinositide kinase, fyv1, putative [Ricinus communis]
12 Hb_011316_020 0.2172531261 - - PREDICTED: uncharacterized protein LOC105648558 [Jatropha curcas]
13 Hb_052689_010 0.2271059774 - - heat shock cognate protein [Solanum commersonii]
14 Hb_001242_090 0.2282722115 - - 40S ribosomal protein S18 [Colletotrichum fioriniae PJ7]
15 Hb_001277_090 0.2289490537 - - PREDICTED: uncharacterized protein LOC105632061 [Jatropha curcas]
16 Hb_000362_120 0.2318250065 - - glutamate receptor 2 plant, putative [Ricinus communis]
17 Hb_008695_140 0.2321518996 - - Vacuolar protein sorting-associated protein VPS9, putative [Ricinus communis]
18 Hb_004785_140 0.2326700466 - - PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform X2 [Jatropha curcas]
19 Hb_000172_560 0.2339296255 - - PREDICTED: pentatricopeptide repeat-containing protein At4g02750 [Jatropha curcas]
20 Hb_000283_080 0.235991763 - - -

Gene co-expression network

sample Hb_000422_120 Hb_000422_120 Hb_004724_230 Hb_004724_230 Hb_000422_120--Hb_004724_230 Hb_001817_020 Hb_001817_020 Hb_000422_120--Hb_001817_020 Hb_073452_010 Hb_073452_010 Hb_000422_120--Hb_073452_010 Hb_054127_050 Hb_054127_050 Hb_000422_120--Hb_054127_050 Hb_001780_120 Hb_001780_120 Hb_000422_120--Hb_001780_120 Hb_000827_060 Hb_000827_060 Hb_000422_120--Hb_000827_060 Hb_004724_230--Hb_054127_050 Hb_002513_030 Hb_002513_030 Hb_004724_230--Hb_002513_030 Hb_004553_020 Hb_004553_020 Hb_004724_230--Hb_004553_020 Hb_001660_020 Hb_001660_020 Hb_004724_230--Hb_001660_020 Hb_001523_020 Hb_001523_020 Hb_004724_230--Hb_001523_020 Hb_001493_180 Hb_001493_180 Hb_001817_020--Hb_001493_180 Hb_001090_050 Hb_001090_050 Hb_001817_020--Hb_001090_050 Hb_000010_340 Hb_000010_340 Hb_001817_020--Hb_000010_340 Hb_000059_050 Hb_000059_050 Hb_001817_020--Hb_000059_050 Hb_000260_570 Hb_000260_570 Hb_001817_020--Hb_000260_570 Hb_015198_020 Hb_015198_020 Hb_001817_020--Hb_015198_020 Hb_000442_080 Hb_000442_080 Hb_073452_010--Hb_000442_080 Hb_000011_330 Hb_000011_330 Hb_073452_010--Hb_000011_330 Hb_000251_090 Hb_000251_090 Hb_073452_010--Hb_000251_090 Hb_002205_190 Hb_002205_190 Hb_073452_010--Hb_002205_190 Hb_008695_140 Hb_008695_140 Hb_073452_010--Hb_008695_140 Hb_000567_380 Hb_000567_380 Hb_073452_010--Hb_000567_380 Hb_054127_050--Hb_001523_020 Hb_054127_050--Hb_002513_030 Hb_001006_240 Hb_001006_240 Hb_054127_050--Hb_001006_240 Hb_001242_090 Hb_001242_090 Hb_054127_050--Hb_001242_090 Hb_001780_120--Hb_001523_020 Hb_119504_010 Hb_119504_010 Hb_001780_120--Hb_119504_010 Hb_001222_050 Hb_001222_050 Hb_001780_120--Hb_001222_050 Hb_001035_070 Hb_001035_070 Hb_001780_120--Hb_001035_070 Hb_001780_120--Hb_004553_020 Hb_004020_020 Hb_004020_020 Hb_000827_060--Hb_004020_020 Hb_129910_010 Hb_129910_010 Hb_000827_060--Hb_129910_010 Hb_000352_340 Hb_000352_340 Hb_000827_060--Hb_000352_340 Hb_085868_010 Hb_085868_010 Hb_000827_060--Hb_085868_010 Hb_003467_030 Hb_003467_030 Hb_000827_060--Hb_003467_030 Hb_000883_060 Hb_000883_060 Hb_000827_060--Hb_000883_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.446303 0.540958 0.306546 0.748687 0.744114 1.95861
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.02712 0.46105 7.5281 1.34892 2.76641

CAGE analysis