Hb_119504_010

Information

Type -
Description -
Location Contig119504: 3-1629
Sequence    

Annotation

kegg
ID rcu:RCOM_0651460
description tyrosine aminotransferase, putative (EC:2.6.1.5)
nr
ID KDP45860.1
description hypothetical protein JCGZ_15304 [Jatropha curcas]
swissprot
ID Q9FN30
description Probable aminotransferase TAT2 OS=Arabidopsis thaliana GN=At5g53970 PE=2 SV=1
trembl
ID A0A067LM46
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15304 PE=4 SV=1
Gene Ontology
ID GO:0016740
description probable aminotransferase tat2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_119504_010 0.0 - - hypothetical protein JCGZ_15304 [Jatropha curcas]
2 Hb_001780_120 0.1873711569 - - PREDICTED: uncharacterized protein LOC105634429 [Jatropha curcas]
3 Hb_007181_020 0.2227912544 - - PREDICTED: uncharacterized protein At4g04980-like [Populus euphratica]
4 Hb_094900_010 0.2426323801 - - ankyrin repeat-containing protein, putative [Ricinus communis]
5 Hb_009005_050 0.2538795975 - - neutral/alkaline invertase 3 [Hevea brasiliensis]
6 Hb_000915_030 0.2542575796 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
7 Hb_000679_220 0.2634994133 - - PREDICTED: uncharacterized protein LOC105637638 [Jatropha curcas]
8 Hb_001433_130 0.2665343342 - - PREDICTED: uncharacterized protein LOC105647468 isoform X1 [Jatropha curcas]
9 Hb_026239_010 0.2676590679 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
10 Hb_020334_010 0.2716327294 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
11 Hb_000422_120 0.2748773097 - - PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Jatropha curcas]
12 Hb_001523_020 0.2761567254 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like isoform X3 [Citrus sinensis]
13 Hb_069251_010 0.2803695739 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
14 Hb_001277_090 0.2807458639 - - PREDICTED: uncharacterized protein LOC105632061 [Jatropha curcas]
15 Hb_000141_030 0.2822101453 - - PREDICTED: scarecrow-like protein 22 [Jatropha curcas]
16 Hb_001035_070 0.2857577142 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF5.7 [Jatropha curcas]
17 Hb_029866_030 0.2878582209 - - hypothetical protein CICLE_v10006898mg [Citrus clementina]
18 Hb_000856_150 0.2882053986 - - PREDICTED: pentatricopeptide repeat-containing protein At1g18900 [Jatropha curcas]
19 Hb_006280_010 0.2894815273 transcription factor TF Family: ERF PREDICTED: AP2-like ethylene-responsive transcription factor TOE3 isoform X2 [Jatropha curcas]
20 Hb_000963_140 0.29145668 - - ubiquitin-protein ligase, putative [Ricinus communis]

Gene co-expression network

sample Hb_119504_010 Hb_119504_010 Hb_001780_120 Hb_001780_120 Hb_119504_010--Hb_001780_120 Hb_007181_020 Hb_007181_020 Hb_119504_010--Hb_007181_020 Hb_094900_010 Hb_094900_010 Hb_119504_010--Hb_094900_010 Hb_009005_050 Hb_009005_050 Hb_119504_010--Hb_009005_050 Hb_000915_030 Hb_000915_030 Hb_119504_010--Hb_000915_030 Hb_000679_220 Hb_000679_220 Hb_119504_010--Hb_000679_220 Hb_001523_020 Hb_001523_020 Hb_001780_120--Hb_001523_020 Hb_001222_050 Hb_001222_050 Hb_001780_120--Hb_001222_050 Hb_001035_070 Hb_001035_070 Hb_001780_120--Hb_001035_070 Hb_000422_120 Hb_000422_120 Hb_001780_120--Hb_000422_120 Hb_004553_020 Hb_004553_020 Hb_001780_120--Hb_004553_020 Hb_007199_010 Hb_007199_010 Hb_007181_020--Hb_007199_010 Hb_007181_020--Hb_001780_120 Hb_002078_440 Hb_002078_440 Hb_007181_020--Hb_002078_440 Hb_013893_010 Hb_013893_010 Hb_007181_020--Hb_013893_010 Hb_000856_150 Hb_000856_150 Hb_007181_020--Hb_000856_150 Hb_094900_010--Hb_000679_220 Hb_159036_010 Hb_159036_010 Hb_094900_010--Hb_159036_010 Hb_003523_040 Hb_003523_040 Hb_094900_010--Hb_003523_040 Hb_122556_010 Hb_122556_010 Hb_094900_010--Hb_122556_010 Hb_005344_030 Hb_005344_030 Hb_094900_010--Hb_005344_030 Hb_001195_360 Hb_001195_360 Hb_009005_050--Hb_001195_360 Hb_012799_100 Hb_012799_100 Hb_009005_050--Hb_012799_100 Hb_002205_130 Hb_002205_130 Hb_009005_050--Hb_002205_130 Hb_000130_110 Hb_000130_110 Hb_009005_050--Hb_000130_110 Hb_009005_050--Hb_000856_150 Hb_005060_020 Hb_005060_020 Hb_009005_050--Hb_005060_020 Hb_014568_020 Hb_014568_020 Hb_000915_030--Hb_014568_020 Hb_181240_010 Hb_181240_010 Hb_000915_030--Hb_181240_010 Hb_000608_460 Hb_000608_460 Hb_000915_030--Hb_000608_460 Hb_004734_050 Hb_004734_050 Hb_000915_030--Hb_004734_050 Hb_000363_150 Hb_000363_150 Hb_000915_030--Hb_000363_150 Hb_004448_060 Hb_004448_060 Hb_000915_030--Hb_004448_060 Hb_001059_170 Hb_001059_170 Hb_000679_220--Hb_001059_170 Hb_000389_050 Hb_000389_050 Hb_000679_220--Hb_000389_050 Hb_002936_080 Hb_002936_080 Hb_000679_220--Hb_002936_080 Hb_000679_220--Hb_005344_030 Hb_004672_030 Hb_004672_030 Hb_000679_220--Hb_004672_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.953666 0.416719 0.45923 0.743484 0.40338 0.531365
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.59342 4.03316 24.074 2.3835 10.9032

CAGE analysis