Hb_159036_010

Information

Type -
Description -
Location Contig159036: 854-1186
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_159036_010 0.0 - - -
2 Hb_122556_010 0.198847736 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
3 Hb_016482_010 0.2249145692 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
4 Hb_094900_010 0.2500142608 - - ankyrin repeat-containing protein, putative [Ricinus communis]
5 Hb_133820_010 0.2690619897 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
6 Hb_003523_040 0.2700112972 - - F15O4.13 [Arabidopsis thaliana]
7 Hb_012572_020 0.2788239987 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
8 Hb_039262_010 0.2814124516 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
9 Hb_011484_010 0.2836006901 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
10 Hb_002918_050 0.2860533637 transcription factor TF Family: SBP PREDICTED: mitochondrial arginine transporter BAC1-like isoform X1 [Jatropha curcas]
11 Hb_123046_010 0.2908510996 - - PREDICTED: uncharacterized protein LOC105801076 [Gossypium raimondii]
12 Hb_002874_040 0.2929359711 - - -
13 Hb_000052_020 0.2977706199 desease resistance Gene Name: ABC_tran PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member 2-like [Jatropha curcas]
14 Hb_000160_320 0.3098121244 - - hypothetical protein POPTR_0004s08730g [Populus trichocarpa]
15 Hb_002888_020 0.3146529428 - - -
16 Hb_005344_030 0.3165670024 - - PREDICTED: UDP-glycosyltransferase 74F2-like [Jatropha curcas]
17 Hb_002360_020 0.3173488325 - - ABC transporter family protein [Hevea brasiliensis]
18 Hb_000086_040 0.3184134226 - - PREDICTED: legumin A-like [Jatropha curcas]
19 Hb_006132_030 0.3204580559 - - hypothetical protein CARUB_v10012126mg, partial [Capsella rubella]
20 Hb_000906_130 0.3225002783 - - -

Gene co-expression network

sample Hb_159036_010 Hb_159036_010 Hb_122556_010 Hb_122556_010 Hb_159036_010--Hb_122556_010 Hb_016482_010 Hb_016482_010 Hb_159036_010--Hb_016482_010 Hb_094900_010 Hb_094900_010 Hb_159036_010--Hb_094900_010 Hb_133820_010 Hb_133820_010 Hb_159036_010--Hb_133820_010 Hb_003523_040 Hb_003523_040 Hb_159036_010--Hb_003523_040 Hb_012572_020 Hb_012572_020 Hb_159036_010--Hb_012572_020 Hb_122556_010--Hb_133820_010 Hb_122556_010--Hb_003523_040 Hb_122556_010--Hb_094900_010 Hb_011484_010 Hb_011484_010 Hb_122556_010--Hb_011484_010 Hb_006132_030 Hb_006132_030 Hb_122556_010--Hb_006132_030 Hb_039262_010 Hb_039262_010 Hb_016482_010--Hb_039262_010 Hb_016482_010--Hb_012572_020 Hb_000032_480 Hb_000032_480 Hb_016482_010--Hb_000032_480 Hb_000906_130 Hb_000906_130 Hb_016482_010--Hb_000906_130 Hb_001617_020 Hb_001617_020 Hb_016482_010--Hb_001617_020 Hb_000679_220 Hb_000679_220 Hb_094900_010--Hb_000679_220 Hb_119504_010 Hb_119504_010 Hb_094900_010--Hb_119504_010 Hb_094900_010--Hb_003523_040 Hb_005344_030 Hb_005344_030 Hb_094900_010--Hb_005344_030 Hb_131102_010 Hb_131102_010 Hb_133820_010--Hb_131102_010 Hb_000154_010 Hb_000154_010 Hb_133820_010--Hb_000154_010 Hb_133820_010--Hb_006132_030 Hb_133820_010--Hb_011484_010 Hb_086077_020 Hb_086077_020 Hb_133820_010--Hb_086077_020 Hb_043708_010 Hb_043708_010 Hb_003523_040--Hb_043708_010 Hb_003523_040--Hb_133820_010 Hb_123046_010 Hb_123046_010 Hb_003523_040--Hb_123046_010 Hb_000103_350 Hb_000103_350 Hb_012572_020--Hb_000103_350 Hb_012572_020--Hb_039262_010 Hb_011986_010 Hb_011986_010 Hb_012572_020--Hb_011986_010 Hb_000853_410 Hb_000853_410 Hb_012572_020--Hb_000853_410
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.614081 0.175231 0 0 0.29163 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.46027 0.287496 1.64381 0.399749 2.23232

CAGE analysis