Hb_000103_350

Information

Type -
Description -
Location Contig103: 296959-302230
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000103_350 0.0 - - -
2 Hb_148392_010 0.2389926737 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
3 Hb_005194_030 0.2511770835 - - PREDICTED: putative formamidase C869.04 isoform X1 [Jatropha curcas]
4 Hb_012572_020 0.2739589653 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
5 Hb_000331_650 0.2749790305 - - PREDICTED: peptide methionine sulfoxide reductase-like [Jatropha curcas]
6 Hb_179022_010 0.2791071195 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
7 Hb_058722_010 0.2814852788 - - -
8 Hb_009355_040 0.284190735 - - ATP binding protein, putative [Ricinus communis]
9 Hb_007276_020 0.2864205306 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
10 Hb_005657_020 0.2919548396 - - -
11 Hb_017438_020 0.2990656047 - - -
12 Hb_002045_270 0.3038811077 - - hypothetical protein JCGZ_21864 [Jatropha curcas]
13 Hb_001235_100 0.3094764243 - - heat-shock protein, putative [Ricinus communis]
14 Hb_000062_110 0.3113976711 transcription factor TF Family: MYB hypothetical protein JCGZ_17894 [Jatropha curcas]
15 Hb_004162_090 0.3131578924 transcription factor TF Family: MYB PREDICTED: transcription factor DIVARICATA [Jatropha curcas]
16 Hb_001789_210 0.3153157282 - - PREDICTED: methyltransferase-like protein 1 isoform X2 [Jatropha curcas]
17 Hb_002890_180 0.3159099963 - - PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3 [Jatropha curcas]
18 Hb_003813_160 0.3177196068 - - -
19 Hb_001017_050 0.3205489535 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
20 Hb_080085_010 0.3206734607 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]

Gene co-expression network

sample Hb_000103_350 Hb_000103_350 Hb_148392_010 Hb_148392_010 Hb_000103_350--Hb_148392_010 Hb_005194_030 Hb_005194_030 Hb_000103_350--Hb_005194_030 Hb_012572_020 Hb_012572_020 Hb_000103_350--Hb_012572_020 Hb_000331_650 Hb_000331_650 Hb_000103_350--Hb_000331_650 Hb_179022_010 Hb_179022_010 Hb_000103_350--Hb_179022_010 Hb_058722_010 Hb_058722_010 Hb_000103_350--Hb_058722_010 Hb_148392_010--Hb_005194_030 Hb_009558_040 Hb_009558_040 Hb_148392_010--Hb_009558_040 Hb_144831_010 Hb_144831_010 Hb_148392_010--Hb_144831_010 Hb_000770_030 Hb_000770_030 Hb_148392_010--Hb_000770_030 Hb_028900_010 Hb_028900_010 Hb_148392_010--Hb_028900_010 Hb_014497_090 Hb_014497_090 Hb_148392_010--Hb_014497_090 Hb_002745_010 Hb_002745_010 Hb_005194_030--Hb_002745_010 Hb_000243_380 Hb_000243_380 Hb_005194_030--Hb_000243_380 Hb_001511_110 Hb_001511_110 Hb_005194_030--Hb_001511_110 Hb_029223_050 Hb_029223_050 Hb_005194_030--Hb_029223_050 Hb_003206_030 Hb_003206_030 Hb_005194_030--Hb_003206_030 Hb_016482_010 Hb_016482_010 Hb_012572_020--Hb_016482_010 Hb_159036_010 Hb_159036_010 Hb_012572_020--Hb_159036_010 Hb_039262_010 Hb_039262_010 Hb_012572_020--Hb_039262_010 Hb_011986_010 Hb_011986_010 Hb_012572_020--Hb_011986_010 Hb_000853_410 Hb_000853_410 Hb_012572_020--Hb_000853_410 Hb_000329_750 Hb_000329_750 Hb_000331_650--Hb_000329_750 Hb_004162_090 Hb_004162_090 Hb_000331_650--Hb_004162_090 Hb_002000_070 Hb_002000_070 Hb_000331_650--Hb_002000_070 Hb_027346_010 Hb_027346_010 Hb_000331_650--Hb_027346_010 Hb_006816_430 Hb_006816_430 Hb_000331_650--Hb_006816_430 Hb_004117_140 Hb_004117_140 Hb_000331_650--Hb_004117_140 Hb_010710_080 Hb_010710_080 Hb_179022_010--Hb_010710_080 Hb_001789_210 Hb_001789_210 Hb_179022_010--Hb_001789_210 Hb_001638_270 Hb_001638_270 Hb_179022_010--Hb_001638_270 Hb_000732_140 Hb_000732_140 Hb_179022_010--Hb_000732_140 Hb_179022_010--Hb_004162_090 Hb_001136_090 Hb_001136_090 Hb_179022_010--Hb_001136_090 Hb_068804_040 Hb_068804_040 Hb_058722_010--Hb_068804_040 Hb_011249_050 Hb_011249_050 Hb_058722_010--Hb_011249_050 Hb_080085_010 Hb_080085_010 Hb_058722_010--Hb_080085_010 Hb_003813_160 Hb_003813_160 Hb_058722_010--Hb_003813_160 Hb_057098_010 Hb_057098_010 Hb_058722_010--Hb_057098_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.379533 0.866099 0 0 1.01546 0.118385
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.849918 0.222555 0.187222 0.278444 0.825926

CAGE analysis