Hb_000032_480

Information

Type -
Description -
Location Contig32: 366420-366964
Sequence    

Annotation

kegg
ID gmx:100790156
description uncharacterized LOC100790156
nr
ID KHN45226.1
description hypothetical protein glysoja_043543 [Glycine soja]
swissprot
ID -
description -
trembl
ID A0A0B2SEN3
description Uncharacterized protein OS=Glycine soja GN=glysoja_043543 PE=4 SV=1
Gene Ontology
ID GO:0008270
description PREDICTED: uncharacterized protein At4g10930-like isoform X1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33750: 364920-392552
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000032_480 0.0 - - hypothetical protein glysoja_043543 [Glycine soja]
2 Hb_000504_130 0.1951115549 - - GPI transamidase component family protein [Populus trichocarpa]
3 Hb_016482_010 0.2602063258 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
4 Hb_007017_020 0.2643910139 - - hypothetical protein JCGZ_21740 [Jatropha curcas]
5 Hb_119504_010 0.3013050791 - - hypothetical protein JCGZ_15304 [Jatropha curcas]
6 Hb_039262_010 0.312204196 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
7 Hb_002360_020 0.3142151283 - - ABC transporter family protein [Hevea brasiliensis]
8 Hb_069251_010 0.3163126877 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
9 Hb_159036_010 0.3237951356 - - -
10 Hb_000731_250 0.3262249487 - - -
11 Hb_000915_030 0.327540843 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
12 Hb_012098_190 0.3275421907 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
13 Hb_012572_020 0.3407287855 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
14 Hb_077935_010 0.3412866942 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
15 Hb_010080_080 0.3420320638 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000946_140 0.3423608354 - - -
17 Hb_001617_020 0.3506463811 - - multidrug resistance pump, putative [Ricinus communis]
18 Hb_004734_050 0.3511649557 - - -
19 Hb_000906_130 0.3532028218 - - -
20 Hb_036311_020 0.362751811 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]

Gene co-expression network

sample Hb_000032_480 Hb_000032_480 Hb_000504_130 Hb_000504_130 Hb_000032_480--Hb_000504_130 Hb_016482_010 Hb_016482_010 Hb_000032_480--Hb_016482_010 Hb_007017_020 Hb_007017_020 Hb_000032_480--Hb_007017_020 Hb_119504_010 Hb_119504_010 Hb_000032_480--Hb_119504_010 Hb_039262_010 Hb_039262_010 Hb_000032_480--Hb_039262_010 Hb_002360_020 Hb_002360_020 Hb_000032_480--Hb_002360_020 Hb_067769_010 Hb_067769_010 Hb_000504_130--Hb_067769_010 Hb_000504_130--Hb_007017_020 Hb_035687_010 Hb_035687_010 Hb_000504_130--Hb_035687_010 Hb_000504_130--Hb_119504_010 Hb_000504_130--Hb_002360_020 Hb_016482_010--Hb_039262_010 Hb_159036_010 Hb_159036_010 Hb_016482_010--Hb_159036_010 Hb_012572_020 Hb_012572_020 Hb_016482_010--Hb_012572_020 Hb_000906_130 Hb_000906_130 Hb_016482_010--Hb_000906_130 Hb_001617_020 Hb_001617_020 Hb_016482_010--Hb_001617_020 Hb_000731_250 Hb_000731_250 Hb_007017_020--Hb_000731_250 Hb_000316_020 Hb_000316_020 Hb_007017_020--Hb_000316_020 Hb_001780_140 Hb_001780_140 Hb_007017_020--Hb_001780_140 Hb_002522_020 Hb_002522_020 Hb_007017_020--Hb_002522_020 Hb_001842_130 Hb_001842_130 Hb_007017_020--Hb_001842_130 Hb_001780_120 Hb_001780_120 Hb_119504_010--Hb_001780_120 Hb_007181_020 Hb_007181_020 Hb_119504_010--Hb_007181_020 Hb_094900_010 Hb_094900_010 Hb_119504_010--Hb_094900_010 Hb_009005_050 Hb_009005_050 Hb_119504_010--Hb_009005_050 Hb_000915_030 Hb_000915_030 Hb_119504_010--Hb_000915_030 Hb_000679_220 Hb_000679_220 Hb_119504_010--Hb_000679_220 Hb_002888_020 Hb_002888_020 Hb_039262_010--Hb_002888_020 Hb_000976_230 Hb_000976_230 Hb_039262_010--Hb_000976_230 Hb_036311_020 Hb_036311_020 Hb_039262_010--Hb_036311_020 Hb_000399_010 Hb_000399_010 Hb_039262_010--Hb_000399_010 Hb_042202_050 Hb_042202_050 Hb_039262_010--Hb_042202_050 Hb_012098_190 Hb_012098_190 Hb_002360_020--Hb_012098_190 Hb_050334_010 Hb_050334_010 Hb_002360_020--Hb_050334_010 Hb_001519_210 Hb_001519_210 Hb_002360_020--Hb_001519_210 Hb_000307_230 Hb_000307_230 Hb_002360_020--Hb_000307_230 Hb_032531_010 Hb_032531_010 Hb_002360_020--Hb_032531_010 Hb_054467_010 Hb_054467_010 Hb_002360_020--Hb_054467_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 4.85667 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.57912 1.87915 13.7419 1.67225 7.71595

CAGE analysis