Hb_005344_030

Information

Type -
Description -
Location Contig5344: 19011-21439
Sequence    

Annotation

kegg
ID pop:POPTR_0007s00870g
description POPTRDRAFT_718172; UDP-glucoronosyl/UDP-glucosyl transferase family protein
nr
ID XP_012075382.1
description PREDICTED: UDP-glycosyltransferase 74F2-like [Jatropha curcas]
swissprot
ID O22822
description UDP-glycosyltransferase 74F2 OS=Arabidopsis thaliana GN=UGT74F2 PE=1 SV=1
trembl
ID A0A067KG70
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10666 PE=3 SV=1
Gene Ontology
ID GO:0016758
description udp-glycosyltransferase 74f2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_47496: 19198-21564
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005344_030 0.0 - - PREDICTED: UDP-glycosyltransferase 74F2-like [Jatropha curcas]
2 Hb_006132_030 0.1901736242 - - hypothetical protein CARUB_v10012126mg, partial [Capsella rubella]
3 Hb_002918_050 0.1909558786 transcription factor TF Family: SBP PREDICTED: mitochondrial arginine transporter BAC1-like isoform X1 [Jatropha curcas]
4 Hb_000052_020 0.1970716019 desease resistance Gene Name: ABC_tran PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member 2-like [Jatropha curcas]
5 Hb_000429_090 0.2023330518 - - PREDICTED: carboxyl-terminal-processing peptidase 3, chloroplastic [Jatropha curcas]
6 Hb_000622_240 0.2035520029 - - PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Jatropha curcas]
7 Hb_091194_010 0.2086645652 - - hypothetical protein POPTR_0006s05430g [Populus trichocarpa]
8 Hb_001229_020 0.2090468219 - - Coiled-coil domain-containing protein, putative [Ricinus communis]
9 Hb_001284_010 0.2116998642 - - hypothetical protein CISIN_1g0279981mg, partial [Citrus sinensis]
10 Hb_042202_050 0.2121296162 - - TPA: hypothetical protein ZEAMMB73_683745 [Zea mays]
11 Hb_000679_220 0.2171285324 - - PREDICTED: uncharacterized protein LOC105637638 [Jatropha curcas]
12 Hb_004346_030 0.2172191891 - - sucrose phosphate phosphatase, putative [Ricinus communis]
13 Hb_001433_130 0.2174330833 - - PREDICTED: uncharacterized protein LOC105647468 isoform X1 [Jatropha curcas]
14 Hb_003734_110 0.2191084201 - - PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein [Jatropha curcas]
15 Hb_008698_010 0.2214917608 - - PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Jatropha curcas]
16 Hb_000530_120 0.2270478691 - - copper transport protein ATOX1 [Hevea brasiliensis]
17 Hb_001490_030 0.2277154368 - - PREDICTED: psbP domain-containing protein 6, chloroplastic [Jatropha curcas]
18 Hb_004672_030 0.2285494677 - - proline oxidase [Manihot esculenta]
19 Hb_050953_010 0.2295268564 - - PREDICTED: uncharacterized protein LOC105779031 [Gossypium raimondii]
20 Hb_004128_070 0.2319238705 - - PREDICTED: thioredoxin-like protein AAED1, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_005344_030 Hb_005344_030 Hb_006132_030 Hb_006132_030 Hb_005344_030--Hb_006132_030 Hb_002918_050 Hb_002918_050 Hb_005344_030--Hb_002918_050 Hb_000052_020 Hb_000052_020 Hb_005344_030--Hb_000052_020 Hb_000429_090 Hb_000429_090 Hb_005344_030--Hb_000429_090 Hb_000622_240 Hb_000622_240 Hb_005344_030--Hb_000622_240 Hb_091194_010 Hb_091194_010 Hb_005344_030--Hb_091194_010 Hb_011484_010 Hb_011484_010 Hb_006132_030--Hb_011484_010 Hb_000154_010 Hb_000154_010 Hb_006132_030--Hb_000154_010 Hb_133820_010 Hb_133820_010 Hb_006132_030--Hb_133820_010 Hb_000702_080 Hb_000702_080 Hb_006132_030--Hb_000702_080 Hb_006132_030--Hb_000052_020 Hb_002918_050--Hb_000052_020 Hb_000997_360 Hb_000997_360 Hb_002918_050--Hb_000997_360 Hb_003734_110 Hb_003734_110 Hb_002918_050--Hb_003734_110 Hb_000125_210 Hb_000125_210 Hb_002918_050--Hb_000125_210 Hb_007747_210 Hb_007747_210 Hb_002918_050--Hb_007747_210 Hb_042202_030 Hb_042202_030 Hb_002918_050--Hb_042202_030 Hb_000052_020--Hb_003734_110 Hb_042202_050 Hb_042202_050 Hb_000052_020--Hb_042202_050 Hb_000052_020--Hb_007747_210 Hb_001284_010 Hb_001284_010 Hb_000052_020--Hb_001284_010 Hb_000052_020--Hb_000997_360 Hb_000429_090--Hb_091194_010 Hb_002809_150 Hb_002809_150 Hb_000429_090--Hb_002809_150 Hb_001493_120 Hb_001493_120 Hb_000429_090--Hb_001493_120 Hb_000530_120 Hb_000530_120 Hb_000429_090--Hb_000530_120 Hb_003849_270 Hb_003849_270 Hb_000429_090--Hb_003849_270 Hb_001136_060 Hb_001136_060 Hb_000429_090--Hb_001136_060 Hb_000107_570 Hb_000107_570 Hb_000622_240--Hb_000107_570 Hb_000028_110 Hb_000028_110 Hb_000622_240--Hb_000028_110 Hb_005846_030 Hb_005846_030 Hb_000622_240--Hb_005846_030 Hb_000638_160 Hb_000638_160 Hb_000622_240--Hb_000638_160 Hb_001435_020 Hb_001435_020 Hb_000622_240--Hb_001435_020 Hb_000164_140 Hb_000164_140 Hb_000622_240--Hb_000164_140 Hb_000429_100 Hb_000429_100 Hb_091194_010--Hb_000429_100 Hb_000169_140 Hb_000169_140 Hb_091194_010--Hb_000169_140 Hb_091194_010--Hb_001136_060 Hb_091194_010--Hb_002809_150 Hb_000705_290 Hb_000705_290 Hb_091194_010--Hb_000705_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.09582 0.28814 1.52076 0.751403 0.332435 1.07965
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.34024 4.11697 5.19338 0.590435 10.2416

CAGE analysis