Hb_004724_230

Information

Type -
Description -
Location Contig4724: 168321-172167
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP34420.1
description hypothetical protein JCGZ_12701 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KQ40
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12701 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44359: 168114-169799
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004724_230 0.0 - - hypothetical protein JCGZ_12701 [Jatropha curcas]
2 Hb_000422_120 0.1503197367 - - PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Jatropha curcas]
3 Hb_054127_050 0.1788323729 - - PREDICTED: uncharacterized protein LOC105638784 isoform X1 [Jatropha curcas]
4 Hb_002513_030 0.1847066829 - - PREDICTED: alpha-L-fucosidase 2-like isoform X2 [Elaeis guineensis]
5 Hb_004553_020 0.2090739328 - - PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Jatropha curcas]
6 Hb_001660_020 0.2143098846 desease resistance Gene Name: NB-ARC hypothetical protein Csa_5G648130 [Cucumis sativus]
7 Hb_001523_020 0.2399597514 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like isoform X3 [Citrus sinensis]
8 Hb_001780_120 0.2408482088 - - PREDICTED: uncharacterized protein LOC105634429 [Jatropha curcas]
9 Hb_073452_010 0.2411361636 - - PREDICTED: chaperonin CPN60-like 2, mitochondrial isoform X2 [Jatropha curcas]
10 Hb_000085_080 0.2553019278 - - PREDICTED: phosphatidate cytidylyltransferase 1 [Jatropha curcas]
11 Hb_001242_090 0.2557489208 - - 40S ribosomal protein S18 [Colletotrichum fioriniae PJ7]
12 Hb_176825_010 0.2586763911 - - PREDICTED: uncharacterized protein LOC105630857 isoform X2 [Jatropha curcas]
13 Hb_055101_010 0.2595722648 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
14 Hb_011316_020 0.2658483837 - - PREDICTED: uncharacterized protein LOC105648558 [Jatropha curcas]
15 Hb_001703_120 0.2703364772 - - PREDICTED: uncharacterized protein LOC105116966 isoform X2 [Populus euphratica]
16 Hb_000362_120 0.2708033031 - - glutamate receptor 2 plant, putative [Ricinus communis]
17 Hb_000172_560 0.2709540283 - - PREDICTED: pentatricopeptide repeat-containing protein At4g02750 [Jatropha curcas]
18 Hb_001222_050 0.2720319807 - - hypothetical protein CICLE_v100161911mg, partial [Citrus clementina]
19 Hb_000827_060 0.2720724724 - - hypothetical protein POPTR_2151s00200g [Populus trichocarpa]
20 Hb_001616_120 0.2722676811 - - -

Gene co-expression network

sample Hb_004724_230 Hb_004724_230 Hb_000422_120 Hb_000422_120 Hb_004724_230--Hb_000422_120 Hb_054127_050 Hb_054127_050 Hb_004724_230--Hb_054127_050 Hb_002513_030 Hb_002513_030 Hb_004724_230--Hb_002513_030 Hb_004553_020 Hb_004553_020 Hb_004724_230--Hb_004553_020 Hb_001660_020 Hb_001660_020 Hb_004724_230--Hb_001660_020 Hb_001523_020 Hb_001523_020 Hb_004724_230--Hb_001523_020 Hb_001817_020 Hb_001817_020 Hb_000422_120--Hb_001817_020 Hb_073452_010 Hb_073452_010 Hb_000422_120--Hb_073452_010 Hb_000422_120--Hb_054127_050 Hb_001780_120 Hb_001780_120 Hb_000422_120--Hb_001780_120 Hb_000827_060 Hb_000827_060 Hb_000422_120--Hb_000827_060 Hb_054127_050--Hb_001523_020 Hb_054127_050--Hb_002513_030 Hb_001006_240 Hb_001006_240 Hb_054127_050--Hb_001006_240 Hb_001242_090 Hb_001242_090 Hb_054127_050--Hb_001242_090 Hb_177179_010 Hb_177179_010 Hb_002513_030--Hb_177179_010 Hb_002513_030--Hb_001523_020 Hb_002513_030--Hb_004553_020 Hb_002513_030--Hb_001780_120 Hb_000362_120 Hb_000362_120 Hb_004553_020--Hb_000362_120 Hb_005188_090 Hb_005188_090 Hb_004553_020--Hb_005188_090 Hb_005043_010 Hb_005043_010 Hb_004553_020--Hb_005043_010 Hb_000172_560 Hb_000172_560 Hb_004553_020--Hb_000172_560 Hb_001616_120 Hb_001616_120 Hb_004553_020--Hb_001616_120 Hb_005701_010 Hb_005701_010 Hb_004553_020--Hb_005701_010 Hb_184520_010 Hb_184520_010 Hb_001660_020--Hb_184520_010 Hb_006268_020 Hb_006268_020 Hb_001660_020--Hb_006268_020 Hb_001660_020--Hb_000422_120 Hb_055101_010 Hb_055101_010 Hb_001660_020--Hb_055101_010 Hb_007064_010 Hb_007064_010 Hb_001660_020--Hb_007064_010 Hb_036311_020 Hb_036311_020 Hb_001523_020--Hb_036311_020 Hb_001523_020--Hb_001780_120 Hb_001222_050 Hb_001222_050 Hb_001523_020--Hb_001222_050 Hb_001523_020--Hb_000362_120 Hb_130194_010 Hb_130194_010 Hb_001523_020--Hb_130194_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.63649 2.01282 0.0672233 2.08401 2.38367 8.88612
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.46001 0.966658 25.4626 7.47049 5.60301

CAGE analysis