Hb_164370_010

Information

Type -
Description -
Location Contig164370: 106-436
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_164370_010 0.0 - - -
2 Hb_007545_020 0.2784513527 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Nicotiana tomentosiformis]
3 Hb_003209_160 0.2832898593 - - PREDICTED: putative SNAP25 homologous protein SNAP30 [Populus euphratica]
4 Hb_002141_040 0.2835922178 - - -
5 Hb_028755_010 0.2919999817 - - PREDICTED: uncharacterized protein LOC104894399 [Beta vulgaris subsp. vulgaris]
6 Hb_004738_050 0.3023203276 - - F-box/leucine rich repeat protein, putative [Ricinus communis]
7 Hb_002639_060 0.3035150709 - - -
8 Hb_172970_010 0.3089591039 - - PREDICTED: uncharacterized protein LOC105637608 [Jatropha curcas]
9 Hb_009486_010 0.3146639865 - - -
10 Hb_000939_010 0.3286074452 - - PREDICTED: transcription factor bHLH113-like [Jatropha curcas]
11 Hb_005241_020 0.3338807068 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
12 Hb_001969_050 0.3338854461 - - PREDICTED: uncharacterized protein LOC105634920 isoform X1 [Jatropha curcas]
13 Hb_050286_020 0.3349855823 - - -
14 Hb_000109_030 0.3373261641 - - -
15 Hb_002154_070 0.3376111898 desease resistance Gene Name: AAA_25 hypothetical protein Csa_6G014750 [Cucumis sativus]
16 Hb_002205_050 0.346559053 - - hypothetical protein JCGZ_03335 [Jatropha curcas]
17 Hb_001846_050 0.3479448897 - - -
18 Hb_004244_010 0.3515707672 - - hypothetical protein JCGZ_06191 [Jatropha curcas]
19 Hb_094647_010 0.3517746453 - - PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Jatropha curcas]
20 Hb_007021_030 0.35484301 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_164370_010 Hb_164370_010 Hb_007545_020 Hb_007545_020 Hb_164370_010--Hb_007545_020 Hb_003209_160 Hb_003209_160 Hb_164370_010--Hb_003209_160 Hb_002141_040 Hb_002141_040 Hb_164370_010--Hb_002141_040 Hb_028755_010 Hb_028755_010 Hb_164370_010--Hb_028755_010 Hb_004738_050 Hb_004738_050 Hb_164370_010--Hb_004738_050 Hb_002639_060 Hb_002639_060 Hb_164370_010--Hb_002639_060 Hb_007545_020--Hb_003209_160 Hb_007545_020--Hb_028755_010 Hb_001846_050 Hb_001846_050 Hb_007545_020--Hb_001846_050 Hb_001965_010 Hb_001965_010 Hb_007545_020--Hb_001965_010 Hb_010317_030 Hb_010317_030 Hb_007545_020--Hb_010317_030 Hb_002490_050 Hb_002490_050 Hb_003209_160--Hb_002490_050 Hb_005356_060 Hb_005356_060 Hb_003209_160--Hb_005356_060 Hb_050286_020 Hb_050286_020 Hb_003209_160--Hb_050286_020 Hb_138652_020 Hb_138652_020 Hb_003209_160--Hb_138652_020 Hb_000109_030 Hb_000109_030 Hb_002141_040--Hb_000109_030 Hb_012180_040 Hb_012180_040 Hb_002141_040--Hb_012180_040 Hb_002205_050 Hb_002205_050 Hb_002141_040--Hb_002205_050 Hb_172970_010 Hb_172970_010 Hb_002141_040--Hb_172970_010 Hb_032631_040 Hb_032631_040 Hb_002141_040--Hb_032631_040 Hb_009543_020 Hb_009543_020 Hb_002141_040--Hb_009543_020 Hb_005081_040 Hb_005081_040 Hb_028755_010--Hb_005081_040 Hb_028755_010--Hb_001846_050 Hb_062482_010 Hb_062482_010 Hb_028755_010--Hb_062482_010 Hb_168343_010 Hb_168343_010 Hb_028755_010--Hb_168343_010 Hb_007348_040 Hb_007348_040 Hb_004738_050--Hb_007348_040 Hb_004738_050--Hb_001846_050 Hb_000445_080 Hb_000445_080 Hb_004738_050--Hb_000445_080 Hb_094647_010 Hb_094647_010 Hb_004738_050--Hb_094647_010 Hb_007827_020 Hb_007827_020 Hb_004738_050--Hb_007827_020 Hb_007021_030 Hb_007021_030 Hb_004738_050--Hb_007021_030 Hb_007926_040 Hb_007926_040 Hb_002639_060--Hb_007926_040 Hb_032496_020 Hb_032496_020 Hb_002639_060--Hb_032496_020 Hb_002639_060--Hb_002205_050 Hb_007101_200 Hb_007101_200 Hb_002639_060--Hb_007101_200 Hb_002639_060--Hb_009543_020 Hb_003786_020 Hb_003786_020 Hb_002639_060--Hb_003786_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.789414 0.45027 0 0 0.126261 3.03306
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.232592 0.346836 0.210472 1.5137

CAGE analysis