Hb_094647_010

Information

Type -
Description -
Location Contig94647: 589-738
Sequence    

Annotation

kegg
ID gmx:100306303
description uncharacterized LOC100306303
nr
ID XP_012082763.1
description PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Jatropha curcas]
swissprot
ID Q9LZI6
description NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B OS=Arabidopsis thaliana GN=At3g62790 PE=3 SV=1
trembl
ID A0A067JZD5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13929 PE=4 SV=1
Gene Ontology
ID GO:0008137
description nadh dehydrogenase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_094647_010 0.0 - - PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Jatropha curcas]
2 Hb_000270_500 0.1544627027 - - PREDICTED: uncharacterized protein LOC105640439 [Jatropha curcas]
3 Hb_009486_010 0.1623694941 - - -
4 Hb_001575_040 0.1923658856 - - PREDICTED: U3 small nucleolar RNA-associated protein 25 isoform X2 [Jatropha curcas]
5 Hb_000414_030 0.2010325582 - - -
6 Hb_006455_080 0.2036885172 - - PREDICTED: transcription factor GTE6-like isoform X2 [Nelumbo nucifera]
7 Hb_006455_110 0.205439478 - - bromodomain-containing protein, putative [Ricinus communis]
8 Hb_000486_060 0.2069967069 - - PREDICTED: immediate early response 3-interacting protein 1-like isoform X2 [Glycine max]
9 Hb_000866_420 0.2078323944 - - Remorin, putative [Ricinus communis]
10 Hb_007827_020 0.2085527926 - - -
11 Hb_005965_010 0.2173199489 transcription factor TF Family: MYB-related PREDICTED: myb family transcription factor APL-like [Jatropha curcas]
12 Hb_006455_090 0.2182597267 - - PREDICTED: transcription factor GTE1-like [Jatropha curcas]
13 Hb_088065_010 0.2186141636 - - hypothetical protein glysoja_007934 [Glycine soja]
14 Hb_001846_050 0.2204075039 - - -
15 Hb_000441_160 0.2210613746 - - ARF GTPase activator, putative [Ricinus communis]
16 Hb_000248_050 0.2215024177 - - PREDICTED: uncharacterized protein LOC105647198 isoform X3 [Jatropha curcas]
17 Hb_139859_010 0.2225250912 - - PREDICTED: cell division control protein 48 homolog D-like [Nicotiana sylvestris]
18 Hb_006663_070 0.223970963 - - PREDICTED: uncharacterized protein LOC105637432 [Jatropha curcas]
19 Hb_007777_020 0.2248617128 - - hypothetical protein JCGZ_14410 [Jatropha curcas]
20 Hb_000878_130 0.2253863792 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_094647_010 Hb_094647_010 Hb_000270_500 Hb_000270_500 Hb_094647_010--Hb_000270_500 Hb_009486_010 Hb_009486_010 Hb_094647_010--Hb_009486_010 Hb_001575_040 Hb_001575_040 Hb_094647_010--Hb_001575_040 Hb_000414_030 Hb_000414_030 Hb_094647_010--Hb_000414_030 Hb_006455_080 Hb_006455_080 Hb_094647_010--Hb_006455_080 Hb_006455_110 Hb_006455_110 Hb_094647_010--Hb_006455_110 Hb_176117_010 Hb_176117_010 Hb_000270_500--Hb_176117_010 Hb_181320_010 Hb_181320_010 Hb_000270_500--Hb_181320_010 Hb_080530_020 Hb_080530_020 Hb_000270_500--Hb_080530_020 Hb_005016_150 Hb_005016_150 Hb_000270_500--Hb_005016_150 Hb_007827_020 Hb_007827_020 Hb_000270_500--Hb_007827_020 Hb_002205_050 Hb_002205_050 Hb_009486_010--Hb_002205_050 Hb_088774_010 Hb_088774_010 Hb_009486_010--Hb_088774_010 Hb_002849_040 Hb_002849_040 Hb_009486_010--Hb_002849_040 Hb_015930_010 Hb_015930_010 Hb_009486_010--Hb_015930_010 Hb_088065_010 Hb_088065_010 Hb_009486_010--Hb_088065_010 Hb_152079_010 Hb_152079_010 Hb_001575_040--Hb_152079_010 Hb_010423_020 Hb_010423_020 Hb_001575_040--Hb_010423_020 Hb_000436_040 Hb_000436_040 Hb_001575_040--Hb_000436_040 Hb_024990_010 Hb_024990_010 Hb_001575_040--Hb_024990_010 Hb_004881_050 Hb_004881_050 Hb_001575_040--Hb_004881_050 Hb_005000_100 Hb_005000_100 Hb_001575_040--Hb_005000_100 Hb_000878_130 Hb_000878_130 Hb_000414_030--Hb_000878_130 Hb_032496_020 Hb_032496_020 Hb_000414_030--Hb_032496_020 Hb_001105_190 Hb_001105_190 Hb_000414_030--Hb_001105_190 Hb_001054_130 Hb_001054_130 Hb_000414_030--Hb_001054_130 Hb_000329_770 Hb_000329_770 Hb_000414_030--Hb_000329_770 Hb_015057_010 Hb_015057_010 Hb_000414_030--Hb_015057_010 Hb_006455_090 Hb_006455_090 Hb_006455_080--Hb_006455_090 Hb_006455_080--Hb_006455_110 Hb_000248_050 Hb_000248_050 Hb_006455_080--Hb_000248_050 Hb_003711_040 Hb_003711_040 Hb_006455_080--Hb_003711_040 Hb_000295_100 Hb_000295_100 Hb_006455_080--Hb_000295_100 Hb_000453_080 Hb_000453_080 Hb_006455_080--Hb_000453_080 Hb_005965_010 Hb_005965_010 Hb_006455_110--Hb_005965_010 Hb_006455_110--Hb_006455_090 Hb_006455_110--Hb_000295_100 Hb_012807_080 Hb_012807_080 Hb_006455_110--Hb_012807_080 Hb_012286_050 Hb_012286_050 Hb_006455_110--Hb_012286_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1556.08 376.988 747.815 110.228 599.25 5284.13
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
512.082 509.814 579.57 557.953 471.225

CAGE analysis