Hb_000414_030

Information

Type -
Description -
Location Contig414: 66919-67284
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000414_030 0.0 - - -
2 Hb_000878_130 0.173604737 - - conserved hypothetical protein [Ricinus communis]
3 Hb_032496_020 0.1772914129 - - -
4 Hb_001105_190 0.1789679963 - - peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
5 Hb_001054_130 0.1866729983 - - Protein SSU72, putative [Ricinus communis]
6 Hb_000329_770 0.1975113206 - - conserved hypothetical protein [Ricinus communis]
7 Hb_015057_010 0.1983033499 - - PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 [Jatropha curcas]
8 Hb_010298_010 0.1985487847 - - PREDICTED: uncharacterized protein At2g02148 [Jatropha curcas]
9 Hb_068946_010 0.199518041 - - hypothetical protein CICLE_v100122621mg, partial [Citrus clementina]
10 Hb_094647_010 0.2010325582 - - PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B-like [Jatropha curcas]
11 Hb_000015_210 0.2026092427 - - PREDICTED: uncharacterized protein LOC105647781 [Jatropha curcas]
12 Hb_006502_080 0.2031466013 - - -
13 Hb_028639_050 0.2039277418 - - Anopheles gambiae str. PEST AGAP012660-PA [Anopheles gambiae str. PEST]
14 Hb_000963_190 0.2041617498 - - Glutamine amidotransferase subunit pdxT, putative [Ricinus communis]
15 Hb_000062_420 0.2053271376 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000442_160 0.2056951039 - - alpha-soluble nsf attachment protein, putative [Ricinus communis]
17 Hb_000442_100 0.2060543185 - - PREDICTED: staphylococcal-like nuclease CAN2 [Jatropha curcas]
18 Hb_001804_060 0.2093836645 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_18059 [Jatropha curcas]
19 Hb_012286_050 0.2099845808 - - PREDICTED: syntaxin-61 [Jatropha curcas]
20 Hb_087762_010 0.2105669586 - - thioredoxin-like family protein [Hevea brasiliensis]

Gene co-expression network

sample Hb_000414_030 Hb_000414_030 Hb_000878_130 Hb_000878_130 Hb_000414_030--Hb_000878_130 Hb_032496_020 Hb_032496_020 Hb_000414_030--Hb_032496_020 Hb_001105_190 Hb_001105_190 Hb_000414_030--Hb_001105_190 Hb_001054_130 Hb_001054_130 Hb_000414_030--Hb_001054_130 Hb_000329_770 Hb_000329_770 Hb_000414_030--Hb_000329_770 Hb_015057_010 Hb_015057_010 Hb_000414_030--Hb_015057_010 Hb_020902_010 Hb_020902_010 Hb_000878_130--Hb_020902_010 Hb_000035_120 Hb_000035_120 Hb_000878_130--Hb_000035_120 Hb_010298_010 Hb_010298_010 Hb_000878_130--Hb_010298_010 Hb_004735_010 Hb_004735_010 Hb_000878_130--Hb_004735_010 Hb_006455_090 Hb_006455_090 Hb_000878_130--Hb_006455_090 Hb_003638_140 Hb_003638_140 Hb_000878_130--Hb_003638_140 Hb_032496_020--Hb_001105_190 Hb_000062_420 Hb_000062_420 Hb_032496_020--Hb_000062_420 Hb_002639_060 Hb_002639_060 Hb_032496_020--Hb_002639_060 Hb_002067_020 Hb_002067_020 Hb_032496_020--Hb_002067_020 Hb_007426_160 Hb_007426_160 Hb_032496_020--Hb_007426_160 Hb_006570_020 Hb_006570_020 Hb_001105_190--Hb_006570_020 Hb_002107_160 Hb_002107_160 Hb_001105_190--Hb_002107_160 Hb_000563_210 Hb_000563_210 Hb_001105_190--Hb_000563_210 Hb_000573_070 Hb_000573_070 Hb_001105_190--Hb_000573_070 Hb_001105_190--Hb_001054_130 Hb_000076_120 Hb_000076_120 Hb_001105_190--Hb_000076_120 Hb_004055_140 Hb_004055_140 Hb_001054_130--Hb_004055_140 Hb_022461_010 Hb_022461_010 Hb_001054_130--Hb_022461_010 Hb_000157_030 Hb_000157_030 Hb_001054_130--Hb_000157_030 Hb_003266_050 Hb_003266_050 Hb_001054_130--Hb_003266_050 Hb_000057_200 Hb_000057_200 Hb_001054_130--Hb_000057_200 Hb_009117_030 Hb_009117_030 Hb_001054_130--Hb_009117_030 Hb_000329_770--Hb_015057_010 Hb_011016_090 Hb_011016_090 Hb_000329_770--Hb_011016_090 Hb_006502_080 Hb_006502_080 Hb_000329_770--Hb_006502_080 Hb_002259_150 Hb_002259_150 Hb_000329_770--Hb_002259_150 Hb_000380_010 Hb_000380_010 Hb_000329_770--Hb_000380_010 Hb_028639_050 Hb_028639_050 Hb_000329_770--Hb_028639_050 Hb_004453_150 Hb_004453_150 Hb_015057_010--Hb_004453_150 Hb_000963_190 Hb_000963_190 Hb_015057_010--Hb_000963_190 Hb_001454_140 Hb_001454_140 Hb_015057_010--Hb_001454_140 Hb_001235_070 Hb_001235_070 Hb_015057_010--Hb_001235_070 Hb_015057_010--Hb_000380_010 Hb_009558_020 Hb_009558_020 Hb_015057_010--Hb_009558_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.22682 0.704083 0.704284 0 0.859934 6.79441
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.34194 2.10629 1.53252 0.847812 0.834017

CAGE analysis