Hb_000035_120

Information

Type -
Description -
Location Contig35: 180003-181349
Sequence    

Annotation

kegg
ID rcu:RCOM_0921580
description CBL-interacting serine/threonine-protein kinase, putative (EC:2.7.11.17)
nr
ID XP_012076439.1
description PREDICTED: CBL-interacting serine/threonine-protein kinase 25-like [Jatropha curcas]
swissprot
ID Q8W1D5
description CBL-interacting serine/threonine-protein kinase 25 OS=Arabidopsis thaliana GN=CIPK25 PE=2 SV=1
trembl
ID B9RNW5
description Non-specific serine/threonine protein kinase OS=Ricinus communis GN=RCOM_0921580 PE=4 SV=1
Gene Ontology
ID GO:0004674
description calcineurin b-like protein-interacting protein kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36404: 179650-181516
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000035_120 0.0 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 25-like [Jatropha curcas]
2 Hb_000538_080 0.077839995 - - Ran GTPase binding protein, putative [Ricinus communis]
3 Hb_000878_130 0.0992570148 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000347_150 0.1188264764 - - Nucleolysin TIAR [Morus notabilis]
5 Hb_000035_130 0.1274503817 - - hypothetical protein Csa_4G652025 [Cucumis sativus]
6 Hb_002235_360 0.140236557 - - PREDICTED: pentatricopeptide repeat-containing protein At5g39680 [Jatropha curcas]
7 Hb_002477_260 0.1408532504 - - PREDICTED: protein phosphatase 2C 16 [Jatropha curcas]
8 Hb_020902_010 0.1408700906 - - PREDICTED: uncharacterized protein LOC104595551 [Nelumbo nucifera]
9 Hb_006455_090 0.1414807093 - - PREDICTED: transcription factor GTE1-like [Jatropha curcas]
10 Hb_024714_030 0.142460296 - - PREDICTED: sm-like protein LSM4 [Jatropha curcas]
11 Hb_003494_240 0.1430625755 - - PREDICTED: uncharacterized protein LOC105644075 [Jatropha curcas]
12 Hb_006198_050 0.143222775 - - protein with unknown function [Ricinus communis]
13 Hb_003638_140 0.1432295836 - - protein binding protein, putative [Ricinus communis]
14 Hb_004735_010 0.1456038436 - - PREDICTED: protein arginine N-methyltransferase PRMT10 [Vitis vinifera]
15 Hb_002903_110 0.1459801683 - - PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha curcas]
16 Hb_035524_030 0.1460245753 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000453_270 0.1503611153 - - PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 [Propithecus coquereli]
18 Hb_006740_020 0.1511956952 - - PREDICTED: bis(5'-adenosyl)-triphosphatase [Jatropha curcas]
19 Hb_022288_010 0.1523711954 - - ubiquitin ligase E3 alpha, putative [Ricinus communis]
20 Hb_019613_020 0.1527141965 - - phospholipase C, putative [Ricinus communis]

Gene co-expression network

sample Hb_000035_120 Hb_000035_120 Hb_000538_080 Hb_000538_080 Hb_000035_120--Hb_000538_080 Hb_000878_130 Hb_000878_130 Hb_000035_120--Hb_000878_130 Hb_000347_150 Hb_000347_150 Hb_000035_120--Hb_000347_150 Hb_000035_130 Hb_000035_130 Hb_000035_120--Hb_000035_130 Hb_002235_360 Hb_002235_360 Hb_000035_120--Hb_002235_360 Hb_002477_260 Hb_002477_260 Hb_000035_120--Hb_002477_260 Hb_000538_080--Hb_000035_130 Hb_003494_240 Hb_003494_240 Hb_000538_080--Hb_003494_240 Hb_024714_030 Hb_024714_030 Hb_000538_080--Hb_024714_030 Hb_000538_080--Hb_002477_260 Hb_000538_080--Hb_000878_130 Hb_020902_010 Hb_020902_010 Hb_000878_130--Hb_020902_010 Hb_010298_010 Hb_010298_010 Hb_000878_130--Hb_010298_010 Hb_004735_010 Hb_004735_010 Hb_000878_130--Hb_004735_010 Hb_006455_090 Hb_006455_090 Hb_000878_130--Hb_006455_090 Hb_003638_140 Hb_003638_140 Hb_000878_130--Hb_003638_140 Hb_000270_020 Hb_000270_020 Hb_000347_150--Hb_000270_020 Hb_003299_090 Hb_003299_090 Hb_000347_150--Hb_003299_090 Hb_000453_270 Hb_000453_270 Hb_000347_150--Hb_000453_270 Hb_005914_090 Hb_005914_090 Hb_000347_150--Hb_005914_090 Hb_001307_140 Hb_001307_140 Hb_000347_150--Hb_001307_140 Hb_073339_010 Hb_073339_010 Hb_000035_130--Hb_073339_010 Hb_006723_020 Hb_006723_020 Hb_000035_130--Hb_006723_020 Hb_143947_010 Hb_143947_010 Hb_000035_130--Hb_143947_010 Hb_000035_130--Hb_000878_130 Hb_008528_010 Hb_008528_010 Hb_002235_360--Hb_008528_010 Hb_006740_020 Hb_006740_020 Hb_002235_360--Hb_006740_020 Hb_001431_070 Hb_001431_070 Hb_002235_360--Hb_001431_070 Hb_113216_010 Hb_113216_010 Hb_002235_360--Hb_113216_010 Hb_006173_020 Hb_006173_020 Hb_002235_360--Hb_006173_020 Hb_001582_030 Hb_001582_030 Hb_002235_360--Hb_001582_030 Hb_127979_010 Hb_127979_010 Hb_002477_260--Hb_127979_010 Hb_002903_110 Hb_002903_110 Hb_002477_260--Hb_002903_110 Hb_011496_010 Hb_011496_010 Hb_002477_260--Hb_011496_010 Hb_003404_030 Hb_003404_030 Hb_002477_260--Hb_003404_030 Hb_001936_050 Hb_001936_050 Hb_002477_260--Hb_001936_050 Hb_000057_060 Hb_000057_060 Hb_002477_260--Hb_000057_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
61.2476 24.7247 1.39053 8.29513 38.5443 122.326
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
33.7918 17.7315 50.0367 6.84411 6.02721

CAGE analysis