Hb_009117_030

Information

Type -
Description -
Location Contig9117: 15300-21622
Sequence    

Annotation

kegg
ID pop:POPTR_0001s32830g
description POPTRDRAFT_549780; hypothetical protein
nr
ID XP_012078462.1
description PREDICTED: histidine protein methyltransferase 1 homolog isoform X2 [Jatropha curcas]
swissprot
ID Q55DL2
description Histidine protein methyltransferase 1 homolog OS=Dictyostelium discoideum GN=DDB_G0270580 PE=3 SV=1
trembl
ID A0A067KC55
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13153 PE=4 SV=1
Gene Ontology
ID GO:0008168
description histidine protein methyltransferase 1 homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62149: 15309-21595
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009117_030 0.0 - - PREDICTED: histidine protein methyltransferase 1 homolog isoform X2 [Jatropha curcas]
2 Hb_005016_050 0.0819886426 - - -
3 Hb_001266_080 0.0869597867 - - PREDICTED: eukaryotic translation initiation factor 2 subunit gamma-like [Jatropha curcas]
4 Hb_000889_020 0.0874541879 - - ribosome biogenesis protein brix, putative [Ricinus communis]
5 Hb_003333_060 0.0882099528 - - PREDICTED: uncharacterized protein LOC105628461 [Jatropha curcas]
6 Hb_032458_010 0.0967942505 - - hypothetical protein JCGZ_21107 [Jatropha curcas]
7 Hb_000166_110 0.0979716858 transcription factor TF Family: SNF2 PREDICTED: protein CHROMATIN REMODELING 25 [Jatropha curcas]
8 Hb_004055_140 0.0988119931 - - PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Jatropha curcas]
9 Hb_000364_150 0.099557113 - - -
10 Hb_003673_060 0.1007132001 - - PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 [Jatropha curcas]
11 Hb_005862_010 0.1011843755 - - PREDICTED: riboflavin biosynthesis protein PYRD, chloroplastic [Jatropha curcas]
12 Hb_000193_270 0.1027974256 transcription factor TF Family: Pseudo ARR-B PREDICTED: two-component response regulator-like APRR1 isoform X1 [Jatropha curcas]
13 Hb_000031_220 0.1046485673 - - PREDICTED: UDP-glycosyltransferase 73B4-like [Jatropha curcas]
14 Hb_001054_130 0.1053210917 - - Protein SSU72, putative [Ricinus communis]
15 Hb_002616_050 0.1068886858 - - PREDICTED: traB domain-containing protein [Jatropha curcas]
16 Hb_003912_090 0.1072517001 - - peptidyl-tRNA hydrolase, putative [Ricinus communis]
17 Hb_007426_030 0.1073091244 - - PREDICTED: pentatricopeptide repeat-containing protein At2g34400 [Jatropha curcas]
18 Hb_004072_020 0.1074118862 - - PREDICTED: uncharacterized protein LOC105635274 [Jatropha curcas]
19 Hb_027472_150 0.1084170036 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 10 [Jatropha curcas]
20 Hb_000580_190 0.1087224723 - - PREDICTED: methionine aminopeptidase 1A isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_009117_030 Hb_009117_030 Hb_005016_050 Hb_005016_050 Hb_009117_030--Hb_005016_050 Hb_001266_080 Hb_001266_080 Hb_009117_030--Hb_001266_080 Hb_000889_020 Hb_000889_020 Hb_009117_030--Hb_000889_020 Hb_003333_060 Hb_003333_060 Hb_009117_030--Hb_003333_060 Hb_032458_010 Hb_032458_010 Hb_009117_030--Hb_032458_010 Hb_000166_110 Hb_000166_110 Hb_009117_030--Hb_000166_110 Hb_023732_090 Hb_023732_090 Hb_005016_050--Hb_023732_090 Hb_027472_150 Hb_027472_150 Hb_005016_050--Hb_027472_150 Hb_003912_090 Hb_003912_090 Hb_005016_050--Hb_003912_090 Hb_005016_050--Hb_003333_060 Hb_000193_270 Hb_000193_270 Hb_005016_050--Hb_000193_270 Hb_071736_010 Hb_071736_010 Hb_001266_080--Hb_071736_010 Hb_001124_080 Hb_001124_080 Hb_001266_080--Hb_001124_080 Hb_007426_030 Hb_007426_030 Hb_001266_080--Hb_007426_030 Hb_004055_140 Hb_004055_140 Hb_001266_080--Hb_004055_140 Hb_000914_070 Hb_000914_070 Hb_001266_080--Hb_000914_070 Hb_000373_240 Hb_000373_240 Hb_000889_020--Hb_000373_240 Hb_000889_020--Hb_000166_110 Hb_007218_080 Hb_007218_080 Hb_000889_020--Hb_007218_080 Hb_011794_060 Hb_011794_060 Hb_000889_020--Hb_011794_060 Hb_000179_020 Hb_000179_020 Hb_000889_020--Hb_000179_020 Hb_006692_030 Hb_006692_030 Hb_000889_020--Hb_006692_030 Hb_008406_190 Hb_008406_190 Hb_003333_060--Hb_008406_190 Hb_000103_080 Hb_000103_080 Hb_003333_060--Hb_000103_080 Hb_010423_040 Hb_010423_040 Hb_003333_060--Hb_010423_040 Hb_000373_280 Hb_000373_280 Hb_003333_060--Hb_000373_280 Hb_063090_010 Hb_063090_010 Hb_003333_060--Hb_063090_010 Hb_000486_010 Hb_000486_010 Hb_003333_060--Hb_000486_010 Hb_004619_050 Hb_004619_050 Hb_032458_010--Hb_004619_050 Hb_005608_030 Hb_005608_030 Hb_032458_010--Hb_005608_030 Hb_000429_120 Hb_000429_120 Hb_032458_010--Hb_000429_120 Hb_001866_110 Hb_001866_110 Hb_032458_010--Hb_001866_110 Hb_032458_010--Hb_000889_020 Hb_002054_040 Hb_002054_040 Hb_000166_110--Hb_002054_040 Hb_005839_060 Hb_005839_060 Hb_000166_110--Hb_005839_060 Hb_004370_030 Hb_004370_030 Hb_000166_110--Hb_004370_030 Hb_001124_160 Hb_001124_160 Hb_000166_110--Hb_001124_160 Hb_000076_120 Hb_000076_120 Hb_000166_110--Hb_000076_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.2009 4.26351 5.01165 7.46314 11.0774 29.8534
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.8017 11.9658 11.436 12.9104 10.5201

CAGE analysis