Hb_007926_040

Information

Type -
Description -
Location Contig7926: 56119-58917
Sequence    

Annotation

kegg
ID rcu:RCOM_0896860
description sulfate transporter, putative
nr
ID XP_002517550.1
description sulfate transporter, putative [Ricinus communis]
swissprot
ID Q0WP36
description Molybdate transporter 2 OS=Arabidopsis thaliana GN=MOT2 PE=1 SV=2
trembl
ID B9RUY1
description Sulfate transporter, putative OS=Ricinus communis GN=RCOM_0896860 PE=4 SV=1
Gene Ontology
ID GO:0016021
description molybdate transporter 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007926_040 0.0 - - sulfate transporter, putative [Ricinus communis]
2 Hb_022288_020 0.1502157345 - - hypothetical protein POPTR_0006s08590g [Populus trichocarpa]
3 Hb_000016_110 0.1672275225 - - PREDICTED: pentatricopeptide repeat-containing protein At4g38010 [Jatropha curcas]
4 Hb_004048_090 0.1754583037 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330 [Jatropha curcas]
5 Hb_041091_010 0.1885593731 - - PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial [Jatropha curcas]
6 Hb_012395_190 0.1889709257 - - hypothetical protein B456_005G053800 [Gossypium raimondii]
7 Hb_010436_020 0.1892769412 - - Dicer-like protein 4 [Morus notabilis]
8 Hb_008247_010 0.1915421852 - - PREDICTED: leucine--tRNA ligase, cytoplasmic [Jatropha curcas]
9 Hb_079738_010 0.1917065426 - - hypothetical protein CISIN_1g036582mg, partial [Citrus sinensis]
10 Hb_036034_010 0.191757963 - - conserved hypothetical protein [Ricinus communis]
11 Hb_010436_030 0.1927890214 - - Ribonuclease III, putative [Ricinus communis]
12 Hb_189118_010 0.1969413746 - - PREDICTED: extended synaptotagmin-1 [Cucumis melo]
13 Hb_002639_060 0.1982327296 - - -
14 Hb_150528_010 0.1982422948 - - conserved hypothetical protein [Ricinus communis]
15 Hb_022288_010 0.1991821683 - - ubiquitin ligase E3 alpha, putative [Ricinus communis]
16 Hb_000122_130 0.2000354012 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000088_010 0.2019380845 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
18 Hb_049675_010 0.2020595836 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
19 Hb_000077_130 0.2025743081 - - PREDICTED: callose synthase 12 [Jatropha curcas]
20 Hb_000497_140 0.2025977742 - - PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Jatropha curcas]

Gene co-expression network

sample Hb_007926_040 Hb_007926_040 Hb_022288_020 Hb_022288_020 Hb_007926_040--Hb_022288_020 Hb_000016_110 Hb_000016_110 Hb_007926_040--Hb_000016_110 Hb_004048_090 Hb_004048_090 Hb_007926_040--Hb_004048_090 Hb_041091_010 Hb_041091_010 Hb_007926_040--Hb_041091_010 Hb_012395_190 Hb_012395_190 Hb_007926_040--Hb_012395_190 Hb_010436_020 Hb_010436_020 Hb_007926_040--Hb_010436_020 Hb_000077_130 Hb_000077_130 Hb_022288_020--Hb_000077_130 Hb_010436_030 Hb_010436_030 Hb_022288_020--Hb_010436_030 Hb_006026_040 Hb_006026_040 Hb_022288_020--Hb_006026_040 Hb_022288_020--Hb_000016_110 Hb_000497_140 Hb_000497_140 Hb_022288_020--Hb_000497_140 Hb_005399_010 Hb_005399_010 Hb_000016_110--Hb_005399_010 Hb_000016_110--Hb_000497_140 Hb_006091_030 Hb_006091_030 Hb_000016_110--Hb_006091_030 Hb_022288_010 Hb_022288_010 Hb_000016_110--Hb_022288_010 Hb_000016_110--Hb_041091_010 Hb_012016_020 Hb_012016_020 Hb_000016_110--Hb_012016_020 Hb_004048_090--Hb_041091_010 Hb_000803_150 Hb_000803_150 Hb_004048_090--Hb_000803_150 Hb_002863_040 Hb_002863_040 Hb_004048_090--Hb_002863_040 Hb_000195_020 Hb_000195_020 Hb_004048_090--Hb_000195_020 Hb_003938_080 Hb_003938_080 Hb_004048_090--Hb_003938_080 Hb_000538_200 Hb_000538_200 Hb_004048_090--Hb_000538_200 Hb_001584_110 Hb_001584_110 Hb_041091_010--Hb_001584_110 Hb_041091_010--Hb_000803_150 Hb_001871_040 Hb_001871_040 Hb_041091_010--Hb_001871_040 Hb_000077_050 Hb_000077_050 Hb_041091_010--Hb_000077_050 Hb_001504_160 Hb_001504_160 Hb_041091_010--Hb_001504_160 Hb_000076_080 Hb_000076_080 Hb_041091_010--Hb_000076_080 Hb_000088_010 Hb_000088_010 Hb_012395_190--Hb_000088_010 Hb_049675_010 Hb_049675_010 Hb_012395_190--Hb_049675_010 Hb_007943_080 Hb_007943_080 Hb_012395_190--Hb_007943_080 Hb_000122_130 Hb_000122_130 Hb_012395_190--Hb_000122_130 Hb_010710_010 Hb_010710_010 Hb_012395_190--Hb_010710_010 Hb_012395_190--Hb_000497_140 Hb_010436_020--Hb_049675_010 Hb_010436_020--Hb_000122_130 Hb_034271_030 Hb_034271_030 Hb_010436_020--Hb_034271_030 Hb_010436_020--Hb_010436_030 Hb_001019_060 Hb_001019_060 Hb_010436_020--Hb_001019_060 Hb_012490_040 Hb_012490_040 Hb_010436_020--Hb_012490_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.494869 0.200389 0.0674971 0 0.836198 1.58405
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.206221 0.378346 0.781153 0.153214 0.433384

CAGE analysis