Hb_054865_080

Information

Type -
Description -
Location Contig54865: 81615-82562
Sequence    

Annotation

kegg
ID rcu:RCOM_0131090
description hypothetical protein
nr
ID XP_012083124.1
description PREDICTED: uncharacterized protein LOC105642789 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JX22
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14203 PE=4 SV=1
Gene Ontology
ID GO:0008168
description s-adenosyl-l-methionine-dependent methyltransferases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_054865_080 0.0 - - PREDICTED: uncharacterized protein LOC105642789 [Jatropha curcas]
2 Hb_000084_170 0.2678445223 - - conserved hypothetical protein [Ricinus communis]
3 Hb_005048_060 0.2923173087 - - conserved hypothetical protein [Ricinus communis]
4 Hb_008890_030 0.314303148 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
5 Hb_016859_010 0.3167744888 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
6 Hb_187136_010 0.3215158045 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
7 Hb_000049_240 0.3224778791 - - PREDICTED: uncharacterized protein LOC105644456 [Jatropha curcas]
8 Hb_002211_040 0.3231873104 - - PREDICTED: subtilisin-like protease SBT3.5 [Jatropha curcas]
9 Hb_009449_010 0.328412429 - - Serine/threonine-protein kinase HT1 [Gossypium arboreum]
10 Hb_098988_010 0.3328041558 - - hypothetical protein JCGZ_18539 [Jatropha curcas]
11 Hb_011077_020 0.3397904499 - - kinase, putative [Ricinus communis]
12 Hb_116293_020 0.3423535011 - - Uncharacterized protein TCM_043787 [Theobroma cacao]
13 Hb_005520_020 0.3427559965 - - hypothetical protein EUGRSUZ_G03336 [Eucalyptus grandis]
14 Hb_026687_030 0.3489552601 - - hypothetical protein AMTR_s00038p00220080 [Amborella trichopoda]
15 Hb_171693_010 0.3490301111 - - hypothetical protein JCGZ_26531 [Jatropha curcas]
16 Hb_049415_010 0.3562568237 - - -
17 Hb_156850_080 0.3620174339 - - PREDICTED: uncharacterized protein LOC105635247 [Jatropha curcas]
18 Hb_095449_010 0.3645657198 - - PREDICTED: low-temperature-induced 65 kDa protein-like [Jatropha curcas]
19 Hb_000868_100 0.3726300455 - - PREDICTED: probable E3 ubiquitin-protein ligase RNF144A [Jatropha curcas]
20 Hb_000671_170 0.3735307099 - - kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_054865_080 Hb_054865_080 Hb_000084_170 Hb_000084_170 Hb_054865_080--Hb_000084_170 Hb_005048_060 Hb_005048_060 Hb_054865_080--Hb_005048_060 Hb_008890_030 Hb_008890_030 Hb_054865_080--Hb_008890_030 Hb_016859_010 Hb_016859_010 Hb_054865_080--Hb_016859_010 Hb_187136_010 Hb_187136_010 Hb_054865_080--Hb_187136_010 Hb_000049_240 Hb_000049_240 Hb_054865_080--Hb_000049_240 Hb_000685_090 Hb_000685_090 Hb_000084_170--Hb_000685_090 Hb_000084_170--Hb_000049_240 Hb_022793_010 Hb_022793_010 Hb_000084_170--Hb_022793_010 Hb_187024_090 Hb_187024_090 Hb_000084_170--Hb_187024_090 Hb_026687_030 Hb_026687_030 Hb_000084_170--Hb_026687_030 Hb_026687_010 Hb_026687_010 Hb_005048_060--Hb_026687_010 Hb_000787_040 Hb_000787_040 Hb_005048_060--Hb_000787_040 Hb_001638_080 Hb_001638_080 Hb_005048_060--Hb_001638_080 Hb_033834_050 Hb_033834_050 Hb_005048_060--Hb_033834_050 Hb_000943_060 Hb_000943_060 Hb_005048_060--Hb_000943_060 Hb_011628_020 Hb_011628_020 Hb_005048_060--Hb_011628_020 Hb_171900_030 Hb_171900_030 Hb_008890_030--Hb_171900_030 Hb_001629_010 Hb_001629_010 Hb_008890_030--Hb_001629_010 Hb_002076_030 Hb_002076_030 Hb_008890_030--Hb_002076_030 Hb_002498_150 Hb_002498_150 Hb_008890_030--Hb_002498_150 Hb_011232_010 Hb_011232_010 Hb_008890_030--Hb_011232_010 Hb_095449_010 Hb_095449_010 Hb_008890_030--Hb_095449_010 Hb_016859_010--Hb_187136_010 Hb_009449_010 Hb_009449_010 Hb_016859_010--Hb_009449_010 Hb_098988_010 Hb_098988_010 Hb_016859_010--Hb_098988_010 Hb_116293_020 Hb_116293_020 Hb_016859_010--Hb_116293_020 Hb_005520_020 Hb_005520_020 Hb_016859_010--Hb_005520_020 Hb_049415_010 Hb_049415_010 Hb_016859_010--Hb_049415_010 Hb_187136_010--Hb_098988_010 Hb_187136_010--Hb_009449_010 Hb_187136_010--Hb_116293_020 Hb_187136_010--Hb_005520_020 Hb_187136_010--Hb_049415_010 Hb_000868_100 Hb_000868_100 Hb_000049_240--Hb_000868_100 Hb_002675_200 Hb_002675_200 Hb_000049_240--Hb_002675_200 Hb_007425_020 Hb_007425_020 Hb_000049_240--Hb_007425_020 Hb_000671_170 Hb_000671_170 Hb_000049_240--Hb_000671_170 Hb_003687_030 Hb_003687_030 Hb_000049_240--Hb_003687_030 Hb_000694_060 Hb_000694_060 Hb_000049_240--Hb_000694_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0945422 2.92829 0.0719119 0.0809386 0 0.0208366
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 2.72732 0.0781512 0.257405 0.694655

CAGE analysis