Hb_031862_030

Information

Type -
Description -
Location Contig31862: 67657-81583
Sequence    

Annotation

kegg
ID rcu:RCOM_0884430
description Cell division cycle protein, putative
nr
ID XP_002522614.1
description Cell division cycle protein, putative [Ricinus communis]
swissprot
ID Q641C9
description Cell division cycle protein 123 homolog OS=Xenopus laevis GN=cdc123 PE=2 SV=1
trembl
ID B9S9E5
description Cell division cycle protein, putative OS=Ricinus communis GN=RCOM_0884430 PE=4 SV=1
Gene Ontology
ID GO:0009987
description cell division cycle protein 123 homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031862_030 0.0 - - Cell division cycle protein, putative [Ricinus communis]
2 Hb_002003_120 0.2550983479 - - PREDICTED: ubiquitin-like-conjugating enzyme ATG10 isoform X1 [Jatropha curcas]
3 Hb_001379_020 0.2715823532 - - -
4 Hb_030291_030 0.280870895 - - PREDICTED: agmatine coumaroyltransferase-2-like [Jatropha curcas]
5 Hb_000926_130 0.2858748021 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
6 Hb_002675_120 0.2859155906 - - DNA-repair protein xrcc1, putative [Ricinus communis]
7 Hb_138607_010 0.2891367898 - - hypothetical protein RCOM_0725500 [Ricinus communis]
8 Hb_003428_100 0.2945380863 - - Polygalacturonase precursor, putative [Ricinus communis]
9 Hb_004143_120 0.2962567113 - - PREDICTED: serine/threonine-protein kinase CTR1 [Jatropha curcas]
10 Hb_005389_190 0.2983155168 - - glutamate receptor 2 plant, putative [Ricinus communis]
11 Hb_000007_110 0.2990471731 - - PREDICTED: peroxidase 11 [Jatropha curcas]
12 Hb_144004_010 0.3017989048 - - hypothetical protein JCGZ_01009 [Jatropha curcas]
13 Hb_125644_010 0.3024441019 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
14 Hb_007072_020 0.3069031489 transcription factor TF Family: bHLH lMYC5 [Hevea brasiliensis]
15 Hb_107201_010 0.3084595809 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_26658 [Jatropha curcas]
16 Hb_041184_010 0.3100784789 desease resistance Gene Name: NB-ARC Disease resistance protein RPS5, putative [Ricinus communis]
17 Hb_002233_040 0.3103311823 - - PREDICTED: uncharacterized protein LOC105629659 [Jatropha curcas]
18 Hb_073171_020 0.3129635234 - - PREDICTED: ABC transporter G family member 29-like [Jatropha curcas]
19 Hb_096811_010 0.3140344369 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At1g61190 [Vitis vinifera]
20 Hb_000645_110 0.3145561356 transcription factor TF Family: GRAS PREDICTED: DELLA protein RGL1-like [Jatropha curcas]

Gene co-expression network

sample Hb_031862_030 Hb_031862_030 Hb_002003_120 Hb_002003_120 Hb_031862_030--Hb_002003_120 Hb_001379_020 Hb_001379_020 Hb_031862_030--Hb_001379_020 Hb_030291_030 Hb_030291_030 Hb_031862_030--Hb_030291_030 Hb_000926_130 Hb_000926_130 Hb_031862_030--Hb_000926_130 Hb_002675_120 Hb_002675_120 Hb_031862_030--Hb_002675_120 Hb_138607_010 Hb_138607_010 Hb_031862_030--Hb_138607_010 Hb_003297_040 Hb_003297_040 Hb_002003_120--Hb_003297_040 Hb_115414_010 Hb_115414_010 Hb_002003_120--Hb_115414_010 Hb_035726_010 Hb_035726_010 Hb_002003_120--Hb_035726_010 Hb_031474_020 Hb_031474_020 Hb_002003_120--Hb_031474_020 Hb_039791_010 Hb_039791_010 Hb_002003_120--Hb_039791_010 Hb_001221_120 Hb_001221_120 Hb_002003_120--Hb_001221_120 Hb_004448_030 Hb_004448_030 Hb_001379_020--Hb_004448_030 Hb_000120_700 Hb_000120_700 Hb_001379_020--Hb_000120_700 Hb_022115_030 Hb_022115_030 Hb_001379_020--Hb_022115_030 Hb_115007_010 Hb_115007_010 Hb_001379_020--Hb_115007_010 Hb_001250_140 Hb_001250_140 Hb_001379_020--Hb_001250_140 Hb_135392_010 Hb_135392_010 Hb_001379_020--Hb_135392_010 Hb_000500_110 Hb_000500_110 Hb_030291_030--Hb_000500_110 Hb_020025_020 Hb_020025_020 Hb_030291_030--Hb_020025_020 Hb_159769_010 Hb_159769_010 Hb_030291_030--Hb_159769_010 Hb_022250_050 Hb_022250_050 Hb_030291_030--Hb_022250_050 Hb_000007_110 Hb_000007_110 Hb_030291_030--Hb_000007_110 Hb_003446_030 Hb_003446_030 Hb_030291_030--Hb_003446_030 Hb_000056_330 Hb_000056_330 Hb_000926_130--Hb_000056_330 Hb_007894_250 Hb_007894_250 Hb_000926_130--Hb_007894_250 Hb_007072_020 Hb_007072_020 Hb_000926_130--Hb_007072_020 Hb_000926_130--Hb_000500_110 Hb_003096_050 Hb_003096_050 Hb_000926_130--Hb_003096_050 Hb_001190_060 Hb_001190_060 Hb_000926_130--Hb_001190_060 Hb_006683_010 Hb_006683_010 Hb_002675_120--Hb_006683_010 Hb_000160_100 Hb_000160_100 Hb_002675_120--Hb_000160_100 Hb_000050_130 Hb_000050_130 Hb_002675_120--Hb_000050_130 Hb_001652_110 Hb_001652_110 Hb_002675_120--Hb_001652_110 Hb_006683_030 Hb_006683_030 Hb_002675_120--Hb_006683_030 Hb_002849_150 Hb_002849_150 Hb_002675_120--Hb_002849_150 Hb_171900_010 Hb_171900_010 Hb_138607_010--Hb_171900_010 Hb_000084_080 Hb_000084_080 Hb_138607_010--Hb_000084_080 Hb_001959_280 Hb_001959_280 Hb_138607_010--Hb_001959_280 Hb_015227_010 Hb_015227_010 Hb_138607_010--Hb_015227_010 Hb_054343_010 Hb_054343_010 Hb_138607_010--Hb_054343_010 Hb_138607_010--Hb_035726_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.023451 0.019567 0 0 0.0235306 0.0526693
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0422768 0.0775669 0.868102 0.0861861

CAGE analysis