Hb_138607_010

Information

Type -
Description -
Location Contig138607: 4448-4832
Sequence    

Annotation

kegg
ID rcu:RCOM_0725500
description hypothetical protein
nr
ID XP_002524902.1
description hypothetical protein RCOM_0725500 [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SFY3
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0725500 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable serine threonine-protein kinase at1g18390

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_138607_010 0.0 - - hypothetical protein RCOM_0725500 [Ricinus communis]
2 Hb_171900_010 0.1949290728 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000084_080 0.210319082 - - PREDICTED: signal recognition particle 54 kDa protein, chloroplastic [Jatropha curcas]
4 Hb_001959_280 0.2217478626 - - PREDICTED: uncharacterized protein LOC105638432 [Jatropha curcas]
5 Hb_015227_010 0.2241606636 - - PREDICTED: uncharacterized protein LOC104903465 [Beta vulgaris subsp. vulgaris]
6 Hb_054343_010 0.2294539776 - - PREDICTED: uncharacterized protein LOC105793279 [Gossypium raimondii]
7 Hb_035726_010 0.2303996146 - - Insulin-degrading enzyme, putative [Ricinus communis]
8 Hb_135684_010 0.23623256 - - hypothetical protein [Pseudomonas tolaasii]
9 Hb_003297_040 0.2385159677 - - Disease resistance protein RPM1, putative [Ricinus communis]
10 Hb_181968_010 0.2434275525 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
11 Hb_055880_010 0.243704775 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_009142_030 0.2438071247 - - UDP-glucosyltransferase, putative [Ricinus communis]
13 Hb_001514_160 0.2438918519 - - hypothetical protein JCGZ_16070 [Jatropha curcas]
14 Hb_159957_020 0.2441009663 - - -
15 Hb_014034_010 0.2441567007 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
16 Hb_000159_030 0.2442124467 - - putative glycosyltransferase, partial [Aralia elata]
17 Hb_002890_050 0.2442219978 - - -
18 Hb_001221_120 0.2444037445 - - cytochrome P450, putative [Ricinus communis]
19 Hb_000967_030 0.2460146587 - - -
20 Hb_006856_020 0.2491643571 - - -

Gene co-expression network

sample Hb_138607_010 Hb_138607_010 Hb_171900_010 Hb_171900_010 Hb_138607_010--Hb_171900_010 Hb_000084_080 Hb_000084_080 Hb_138607_010--Hb_000084_080 Hb_001959_280 Hb_001959_280 Hb_138607_010--Hb_001959_280 Hb_015227_010 Hb_015227_010 Hb_138607_010--Hb_015227_010 Hb_054343_010 Hb_054343_010 Hb_138607_010--Hb_054343_010 Hb_035726_010 Hb_035726_010 Hb_138607_010--Hb_035726_010 Hb_171900_010--Hb_054343_010 Hb_009557_010 Hb_009557_010 Hb_171900_010--Hb_009557_010 Hb_000967_030 Hb_000967_030 Hb_171900_010--Hb_000967_030 Hb_000159_030 Hb_000159_030 Hb_171900_010--Hb_000159_030 Hb_159957_020 Hb_159957_020 Hb_171900_010--Hb_159957_020 Hb_019299_050 Hb_019299_050 Hb_171900_010--Hb_019299_050 Hb_000084_080--Hb_171900_010 Hb_011618_020 Hb_011618_020 Hb_000084_080--Hb_011618_020 Hb_150366_010 Hb_150366_010 Hb_000084_080--Hb_150366_010 Hb_001221_120 Hb_001221_120 Hb_000084_080--Hb_001221_120 Hb_002890_050 Hb_002890_050 Hb_000084_080--Hb_002890_050 Hb_001959_280--Hb_015227_010 Hb_135684_010 Hb_135684_010 Hb_001959_280--Hb_135684_010 Hb_002837_140 Hb_002837_140 Hb_001959_280--Hb_002837_140 Hb_001959_280--Hb_035726_010 Hb_010866_010 Hb_010866_010 Hb_001959_280--Hb_010866_010 Hb_115414_010 Hb_115414_010 Hb_001959_280--Hb_115414_010 Hb_015227_010--Hb_135684_010 Hb_137695_010 Hb_137695_010 Hb_015227_010--Hb_137695_010 Hb_015227_010--Hb_002837_140 Hb_015227_010--Hb_010866_010 Hb_000666_020 Hb_000666_020 Hb_015227_010--Hb_000666_020 Hb_054343_010--Hb_009557_010 Hb_023142_010 Hb_023142_010 Hb_054343_010--Hb_023142_010 Hb_128193_010 Hb_128193_010 Hb_054343_010--Hb_128193_010 Hb_054343_010--Hb_000159_030 Hb_033843_020 Hb_033843_020 Hb_035726_010--Hb_033843_020 Hb_035726_020 Hb_035726_020 Hb_035726_010--Hb_035726_020 Hb_035726_010--Hb_115414_010 Hb_001172_030 Hb_001172_030 Hb_035726_010--Hb_001172_030 Hb_022815_020 Hb_022815_020 Hb_035726_010--Hb_022815_020 Hb_001003_020 Hb_001003_020 Hb_035726_010--Hb_001003_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.244573 0.135157 0 0 0.115789 0.113816
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.62518 1.12305

CAGE analysis