Hb_150366_010

Information

Type -
Description -
Location Contig150366: 126-1109
Sequence    

Annotation

kegg
ID mtr:MTR_3g043850
description hypothetical protein
nr
ID BAJ53217.1
description JHL22C18.10 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NUA7
description JHL22C18.10 protein OS=Jatropha curcas GN=JHL22C18.10 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_150366_010 0.0 - - JHL22C18.10 [Jatropha curcas]
2 Hb_011618_020 0.2241746169 - - hypothetical protein OsI_13615 [Oryza sativa Indica Group]
3 Hb_136092_010 0.2547718099 - - hypothetical protein POPTR_0019s12290g [Populus trichocarpa]
4 Hb_011772_010 0.2548098521 - - -
5 Hb_000084_080 0.2587549175 - - PREDICTED: signal recognition particle 54 kDa protein, chloroplastic [Jatropha curcas]
6 Hb_003297_040 0.2606223264 - - Disease resistance protein RPM1, putative [Ricinus communis]
7 Hb_005625_050 0.2757183512 - - hypothetical protein PRUPE_ppa024499mg, partial [Prunus persica]
8 Hb_007757_090 0.2758894709 - - PREDICTED: uncharacterized protein LOC105793478 [Gossypium raimondii]
9 Hb_006261_010 0.2761822912 - - PREDICTED: uncharacterized protein LOC104110884 [Nicotiana tomentosiformis]
10 Hb_019299_050 0.2763206551 - - -
11 Hb_000946_020 0.2801520635 - - hypothetical protein PRUPE_ppa023262mg [Prunus persica]
12 Hb_000967_030 0.2814801751 - - -
13 Hb_000159_030 0.2853828664 - - putative glycosyltransferase, partial [Aralia elata]
14 Hb_169597_010 0.2853922692 - - PREDICTED: uncharacterized protein LOC104903465 [Beta vulgaris subsp. vulgaris]
15 Hb_159957_020 0.2858108595 - - -
16 Hb_003927_030 0.286720602 - - unnamed protein product [Coffea canephora]
17 Hb_000052_030 0.2870751533 - - -
18 Hb_018202_060 0.2890813291 - - PREDICTED: germin-like protein subfamily 1 member 13 [Jatropha curcas]
19 Hb_055880_010 0.2925362388 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_009142_030 0.2935122811 - - UDP-glucosyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_150366_010 Hb_150366_010 Hb_011618_020 Hb_011618_020 Hb_150366_010--Hb_011618_020 Hb_136092_010 Hb_136092_010 Hb_150366_010--Hb_136092_010 Hb_011772_010 Hb_011772_010 Hb_150366_010--Hb_011772_010 Hb_000084_080 Hb_000084_080 Hb_150366_010--Hb_000084_080 Hb_003297_040 Hb_003297_040 Hb_150366_010--Hb_003297_040 Hb_005625_050 Hb_005625_050 Hb_150366_010--Hb_005625_050 Hb_169597_010 Hb_169597_010 Hb_011618_020--Hb_169597_010 Hb_003927_030 Hb_003927_030 Hb_011618_020--Hb_003927_030 Hb_000052_030 Hb_000052_030 Hb_011618_020--Hb_000052_030 Hb_000946_020 Hb_000946_020 Hb_011618_020--Hb_000946_020 Hb_002570_050 Hb_002570_050 Hb_011618_020--Hb_002570_050 Hb_093039_010 Hb_093039_010 Hb_011618_020--Hb_093039_010 Hb_001596_010 Hb_001596_010 Hb_136092_010--Hb_001596_010 Hb_136092_010--Hb_011772_010 Hb_003935_010 Hb_003935_010 Hb_136092_010--Hb_003935_010 Hb_002800_020 Hb_002800_020 Hb_136092_010--Hb_002800_020 Hb_019253_010 Hb_019253_010 Hb_136092_010--Hb_019253_010 Hb_018202_060 Hb_018202_060 Hb_011772_010--Hb_018202_060 Hb_002965_130 Hb_002965_130 Hb_011772_010--Hb_002965_130 Hb_011772_010--Hb_019253_010 Hb_000330_120 Hb_000330_120 Hb_011772_010--Hb_000330_120 Hb_011772_010--Hb_002570_050 Hb_138607_010 Hb_138607_010 Hb_000084_080--Hb_138607_010 Hb_171900_010 Hb_171900_010 Hb_000084_080--Hb_171900_010 Hb_000084_080--Hb_011618_020 Hb_001221_120 Hb_001221_120 Hb_000084_080--Hb_001221_120 Hb_002890_050 Hb_002890_050 Hb_000084_080--Hb_002890_050 Hb_006856_020 Hb_006856_020 Hb_003297_040--Hb_006856_020 Hb_000832_350 Hb_000832_350 Hb_003297_040--Hb_000832_350 Hb_001496_020 Hb_001496_020 Hb_003297_040--Hb_001496_020 Hb_003297_040--Hb_011618_020 Hb_006261_010 Hb_006261_010 Hb_003297_040--Hb_006261_010 Hb_007757_090 Hb_007757_090 Hb_003297_040--Hb_007757_090 Hb_005625_050--Hb_007757_090 Hb_005625_050--Hb_006261_010 Hb_019299_050 Hb_019299_050 Hb_005625_050--Hb_019299_050 Hb_005625_050--Hb_000946_020 Hb_000967_030 Hb_000967_030 Hb_005625_050--Hb_000967_030 Hb_005625_050--Hb_169597_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.0423115 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0406664 0 0.327206 0.166192

CAGE analysis